PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03129.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 358aa MW: 40549.8 Da PI: 6.8364

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.6e-19	102	148	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +lv++vkq+G + W+ Ia++m gR +kqc++rw+++l PIN03129.1 102 KGQWTSEEDRKLVKLVKQYGYRKWSVIAEKMV-GRIGKQCRERWHNHL 148 799***************************.***********97 PP
2	Myb_DNA-binding	57	4.6e-18	157	197	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eE++l+++a+++ G++ W+ Ia++++ gRt++ +k++w+ PIN03129.1 157 VWTEEEEQLIIEAHERVGNR-WAEIAKCVP-GRTENAIKNHWN 197 7*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MEGGGEIFLY NPNSWLESSP PLTTIDNMIL WPADHMTNNH PPSIFDHHQN HVLFSGFSNG 60 GGPTDHQNFN YSKNCGGSKN ESTLGAVKKT EQKGNSSACW VKGQWTSEED RKLVKLVKQY 120 GYRKWSVIAE KMVGRIGKQC RERWHNHLRP DIKKDLVWTE EEEQLIIEAH ERVGNRWAEI 180 AKCVPGRTEN AIKNHWNATK RKQTSKRKIK RPERLNGLIQ STLLEDYIKK KYFKGSSTST 240 NPNNNPKSND QMVQNNDQDD DEECNSTSYL AFETFEEEMN FMKQLFENNG NCSNGLNGTG 300 DSSFSSGNEI LSSSSSSSSS NPNMEGHGGN YRGIIPMQEG QDVFSPTEIY HCSYVHVG

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MEGGGEIFLY NPNSWLESSP PLTTIDNMIL WPADHMTNNH PPSIFDHHQN HVLFSGFSNG  60
GGPTDHQNFN YSKNCGGSKN ESTLGAVKKT EQKGNSSACW VKGQWTSEED RKLVKLVKQY  120
GYRKWSVIAE KMVGRIGKQC RERWHNHLRP DIKKDLVWTE EEEQLIIEAH ERVGNRWAEI  180
AKCVPGRTEN AIKNHWNATK RKQTSKRKIK RPERLNGLIQ STLLEDYIKK KYFKGSSTST  240
NPNNNPKSND QMVQNNDQDD DEECNSTSYL AFETFEEEMN FMKQLFENNG NCSNGLNGTG  300
DSSFSSGNEI LSSSSSSSSS NPNMEGHGGN YRGIIPMQEG QDVFSPTEIY HCSYVHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	1e-51	MYB family protein