PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02032.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 292aa    MW: 33063.1 Da    PI: 9.1625
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94e-072872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+ E + + +a +++  +   +W ++a++++ g+t  ++   + 
       PIN02032.1 28 RWTPAENKAFENALAMFDENtpdRWVKVAAMVP-GKTVGDIMRQYK 72
                     9********************************.***999987775 PP
2Myb_DNA-binding45.91.3e-14132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PIN02032.1 132 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 176
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MKWEMEILAP SSFFSNSSWF PEESSSTRWT PAENKAFENA LAMFDENTPD RWVKVAAMVP  60
GKTVGDIMRQ YKELEDDVSS IEAGLIPVPG YTTSSPFTLE WGGSHGYDHG FKHGRKTSSG  120
RTTEQERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ  180
LSGGKDKRRA SIHDITTVNL NEDRSASPED KKSPSPEKTS VQKPPFQWNQ PSNGTLMGFS  240
SPCNGNMFTS PSYGMNSYGI KLHDQRGVMN ETYMGFLNMM FQMQSGLHYP NA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-104MYB_related family protein