PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00955.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 291aa MW: 32019.2 Da PI: 9.9382

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+t Ed ll d++++ G g+W++ +++ g+ R++k+c++rw +yl PIN00955.1 14 RGPWSTKEDALLSDYIQENGEGQWRSLPKKAGLLRCGKSCRLRWMNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	51	3.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+v+++ +lG++ W++Ia +++ gRt++++k++w+++l PIN00955.1 67 RGNITQDEEDLIVRLHGLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MGRSPCCSKV GLRRGPWSTK EDALLSDYIQ ENGEGQWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPGIKRGNI TQDEEDLIVR LHGLLGNRWS LIAGRLPGRT DNEIKNYWNT HLLKKLKTAG 120 INPKSQINLP KSSKNKNTTT ASGGAAVNKK KKKQKKEKEK EKVSVGNGKQ STDPNREQSN 180 DSPPKTKVYL PKPMRVSSVF SRTSSYDSLV SGSSSSEGGG EAAEKVAEVA SYTPAAWPPL 240 LELDDAGYGG AGNVDDFLGV GCILPVLQQS DSLSGDVNMW EQVYDEYFQL L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	2e-68	MYB family protein