PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00833.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 225aa    MW: 25153 Da    PI: 4.9153
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29.1e-142066248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g+WT eEde+l + v++ G g W+  ++  g+ R+ k+c+ rw +yl
       PIN00833.1 20 GPWTREEDEILFNFVTRNGHGKWRCLPKLAGLLRCHKSCRRRWMNYL 66
                     89*****************************99************97 PP

2Myb_DNA-binding50.16.4e-1672114145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg++T+eEde ++++ ++lG++ W+ Ia++++ gRt++++k+ w+
       PIN00833.1  72 RGNFTEEEDEAIIRLQAELGNK-WAEIAAELP-GRTDNEIKNVWH 114
                      89********************.*********.*********997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MPSQNRGKAT CCDHTELKQG PWTREEDEIL FNFVTRNGHG KWRCLPKLAG LLRCHKSCRR  60
RWMNYLCPDI KRGNFTEEED EAIIRLQAEL GNKWAEIAAE LPGRTDNEIK NVWHHRLKKK  120
ALERNQNLSG LYGGGGLMVE MQSDLISAVY SSGEIWSAAT AAASFGNGLE LELNFEQNHA  180
GDSSSEISQE ASATGSGDDG GSEDPGDMSY DLGESFWKQC LWPEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.13e-55MYB family protein