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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25153 Da PI: 4.9153 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.2 | 9.1e-14 | 20 | 66 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT eEde+l + v++ G g W+ ++ g+ R+ k+c+ rw +yl PIN00833.1 20 GPWTREEDEILFNFVTRNGHGKWRCLPKLAGLLRCHKSCRRRWMNYL 66 89*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.1 | 6.4e-16 | 72 | 114 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++T+eEde ++++ ++lG++ W+ Ia++++ gRt++++k+ w+ PIN00833.1 72 RGNFTEEEDEAIIRLQAELGNK-WAEIAAELP-GRTDNEIKNVWH 114 89********************.*********.*********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MPSQNRGKAT CCDHTELKQG PWTREEDEIL FNFVTRNGHG KWRCLPKLAG LLRCHKSCRR 60 RWMNYLCPDI KRGNFTEEED EAIIRLQAEL GNKWAEIAAE LPGRTDNEIK NVWHHRLKKK 120 ALERNQNLSG LYGGGGLMVE MQSDLISAVY SSGEIWSAAT AAASFGNGLE LELNFEQNHA 180 GDSSSEISQE ASATGSGDDG GSEDPGDMSY DLGESFWKQC LWPEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 3e-55 | MYB family protein |