PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87335.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 315aa    MW: 35591.8 Da    PI: 5.2662
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.27.7e-24137197259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg +WrKYGqK++ ++++prsY+rCt++   +C++ k+v+  +++p + ++tY g+H+++
  OWM87335.1 137 EDGQAWRKYGQKVILNAKYPRSYFRCTHKydqDCKAAKQVQMMEDNPGMYQTTYIGTHTCN 197
                 8***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGSVGIMCPD DSKKEKLIRE LTEGQDSALK LFTLFRKPVS EDGLSDLAGE LLVKILGCFD  60
QGLCLVGCSD RVGENVLNSC VLEHHQDSAF SPDNVMEESE DSSGTKKRAN ACLKDRRGCY  120
KRRKSSQTWI TVKPTMEDGQ AWRKYGQKVI LNAKYPRSYF RCTHKYDQDC KAAKQVQMME  180
DNPGMYQTTY IGTHTCNRDQ IKPPQLIVPD YSQPGSSSFN IVFPEHIKTE EKDQVDTKSD  240
LTVDNVSFSS LQDNTSSFLQ TDHLMAGFEF SSSHQEDIAR MYRLGVEDDG AHSEMELLVR  300
GGFHGDFHFD DKEFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106124KKRANACLKDRRGCYKRRK
2121148KRRKSSQTWITVKPTMEDGQAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-44WRKY family protein