PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81903.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 406aa MW: 44987.1 Da PI: 9.9662

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.8	3.8e-27	282	334	3	54
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYeg 54 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYe OWM81903.1 282 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEV 334 99*********************9988********************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MEEVEEANRA AVKSCHRVLN LLSDQTQSQS QWRNLMVETG EGVFRFKRVI SLLNKGLGHP 60 RIRKLNRLHH PPLPLSILLD SSLTSTDPSR LNNLHFLLPS STYPVSYPAG SSLQELRSHP 120 KGSFFPTLEL SSNGPGGKSP LQFGQLHPGP SPAQLHFLQQ QKLQHMYGSS NSGISLNFDS 180 SSCTPTPTPT PAMSSTRSFI SSLSMDASVA NMDASSFHLI GAARTSDQNS HHKRKCSGRG 240 EDGSVKCSSN SRCHCSKKRK HRVKRSIKVP AVSNKLADIP PDDYSWRKYG QKPIKGSPHP 300 RGYYKCSSMR GCPARKHVER CLEDPSMLIV TYEVSWKVEG LFYVLLRRFS SQQGKGDSED 360 FDLTFACLNK VSAWVVVDGA SHFQEGLTWL SYIIVSLTGI PSVTFT

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MEEVEEANRA AVKSCHRVLN LLSDQTQSQS QWRNLMVETG EGVFRFKRVI SLLNKGLGHP  60
RIRKLNRLHH PPLPLSILLD SSLTSTDPSR LNNLHFLLPS STYPVSYPAG SSLQELRSHP  120
KGSFFPTLEL SSNGPGGKSP LQFGQLHPGP SPAQLHFLQQ QKLQHMYGSS NSGISLNFDS  180
SSCTPTPTPT PAMSSTRSFI SSLSMDASVA NMDASSFHLI GAARTSDQNS HHKRKCSGRG  240
EDGSVKCSSN SRCHCSKKRK HRVKRSIKVP AVSNKLADIP PDDYSWRKYG QKPIKGSPHP  300
RGYYKCSSMR GCPARKHVER CLEDPSMLIV TYEVSWKVEG LFYVLLRRFS SQQGKGDSED  360
FDLTFACLNK VSAWVVVDGA SHFQEGLTWL SYIIVSLTGI PSVTFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04670.1	1e-89	WRKY family protein