PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75383.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 635aa MW: 68182.9 Da PI: 7.3993

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	380	438	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ OWM75383.1 380 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 438 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MAKAAGGGGG GGLSFDSDPF PVSFLRHHHP TVFNSFPDST PSSSSSPSDL ATATNNRLNY 60 SVKPITSRSL SSMDHRHHQF PMSLSSSCAH EDDDSPAPSD QKGVIGNKVI DEMDFFAISN 120 TTRASHDGHH HQPDHHGISH GGDDDRERTS DIRSPARIEL NVNTGLNLLT VNSSSDQSTV 180 DDGISPNAED KRARSELAVL QAEVERMSAE NQRLRNMLSQ VTSNYNSLQV HLSTLMKEQK 240 AKNGSEPDPN EKRHDTLNGR PVVPRQFMDL GLASTEDPNT DDHSPTSSEE RSADRSGSPV 300 NNSEVASRGV SMDQDRSNKE YGKRSRREVS PNQHVSTRGW SPNKVQRFSP PKNSNVDQTE 360 ATMRKARVSV RARSEAAMVT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC 420 AEDRTILITT YEGNHNHPLP PAAMAMASTT SSAARMLLSG SMSSSDGLMN TNFLTRTLLP 480 CSSSMATISA SAPFPTVTLD LTQNPNSSSL LQSPPSQLQV PFLNPTQNFP SSSAALLPQI 540 FGQALYNQSK FSGLQTSQDV KAAQSSDHQG INDTLTAALT SDPNFTAALA AAISSLIGGS 600 SSHAGNSTSN SIPGHAPSGN SIPSGNNKIS NNSSN

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MAKAAGGGGG GGLSFDSDPF PVSFLRHHHP TVFNSFPDST PSSSSSPSDL ATATNNRLNY  60
SVKPITSRSL SSMDHRHHQF PMSLSSSCAH EDDDSPAPSD QKGVIGNKVI DEMDFFAISN  120
TTRASHDGHH HQPDHHGISH GGDDDRERTS DIRSPARIEL NVNTGLNLLT VNSSSDQSTV  180
DDGISPNAED KRARSELAVL QAEVERMSAE NQRLRNMLSQ VTSNYNSLQV HLSTLMKEQK  240
AKNGSEPDPN EKRHDTLNGR PVVPRQFMDL GLASTEDPNT DDHSPTSSEE RSADRSGSPV  300
NNSEVASRGV SMDQDRSNKE YGKRSRREVS PNQHVSTRGW SPNKVQRFSP PKNSNVDQTE  360
ATMRKARVSV RARSEAAMVT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC  420
AEDRTILITT YEGNHNHPLP PAAMAMASTT SSAARMLLSG SMSSSDGLMN TNFLTRTLLP  480
CSSSMATISA SAPFPTVTLD LTQNPNSSSL LQSPPSQLQV PFLNPTQNFP SSSAALLPQI  540
FGQALYNQSK FSGLQTSQDV KAAQSSDHQG INDTLTAALT SDPNFTAALA AAISSLIGGS  600
SSHAGNSTSN SIPGHAPSGN SIPSGNNKIS NNSSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	5e-99	WRKY family protein