PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71138.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CAMTA

Protein Properties

Length: 922aa MW: 103805 Da PI: 7.5816

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	146.6	6.6e-46	31	134	4	106
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e +rwl+++ei+aiL n++ ++++ ++ + pksg++iL++rk++r+frkDGy+wkkkkdgktv+E+he+LKvg+ e +++yYah+ +nptf rrcywl OWM71138.1 31 EaPTRWLRPNEIHAILCNYKYFSISVKPVNLPKSGAIILFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGTEERIHVYYAHGLDNPTFVRRCYWL 129 4479*********************************************************************************************** PP CG-1 102 Leeel 106 L++ + OWM71138.1 130 LDKYQ 134 *9864 PP

Sequence ? help Back to Top
Protein Sequence Length: 922 aa Download sequence
MEGTVQGQLF GTEIHGFHTL QDLDIRSIME EAPTRWLRPN EIHAILCNYK YFSISVKPVN 60 LPKSGAIILF DRKMLRNFRK DGYNWKKKKD GKTVKEAHEH LKVGTEERIH VYYAHGLDNP 120 TFVRRCYWLL DKYQSQNSPA TPVNSNSSSI SDPPASWPLS EEFDSGANQT LYHLEKHVTV 180 PDDSLTYKSH EMQLHEINTL EWDELVTDDS NNFGAPRGGS ISHSDQQYIA EHKVSLLVES 240 SRLGDLSDSV TKMGFQVESK RDSELGTNNP MEVLVNDGLQ SQDSFGRWMN RIITDSPGSV 300 DDALIESSLS FSCYSSGSSQ VDIQQSPGPG QIFSITDVSP SSVLSNEKTK ILVTGFFQEG 360 YLHLSKSNLF CITGDVCVPA EIIQVGVYRC LLTPQPAGLV NLYLSFDGHK PISQVLNFEY 420 RDPPPHASAV ESSNEEKIEQ EFLVQMRLAK LLLSTPKCLD IASSKISPST LKEGRKFASK 480 TSNLMKSWEY LIKLVEDEKA SFARAKESLF ELMLKSRLRE WLLERLVGGF KSSELDSRGQ 540 GVIHLCAILG YTWSVQLFSW SSLSLDFRDK FGWTALHWAA YYGREKMVAS LLSAGAKPNL 600 VTDPTPENPG GSTAADLASR NGHEGLAAYL AEKGLVQHFK DMSLAGNISG SLSDSYDASA 660 LSALANENNN LTEDELYLKD TLAAYRTAAD AAGRIQSAFR EHSLKIRSKH VQFLNPEEEA 720 RSIIAAMKIQ HAFRNYEVKK QMVAASRIQH RFRTWKLRRE FLNMRRHAIK IQAAFRAFQA 780 RRQYVKIVWS VGVLEKAILR WRLKRKGFRG LPSDPLVPDQ TTQQSDTEED FFQVSRRQAE 840 ERVEQSVVRV QAMFRSKKAQ EEYRRMKLAH VEAEAPKPCP GLWLLLIEVG SSLFEASLAL 900 LGLAHLGFGI IAAKHEPYGL SF

Sequence ? help Back to Top

Protein Sequence Length: 922 aa Download sequence

MEGTVQGQLF GTEIHGFHTL QDLDIRSIME EAPTRWLRPN EIHAILCNYK YFSISVKPVN  60
LPKSGAIILF DRKMLRNFRK DGYNWKKKKD GKTVKEAHEH LKVGTEERIH VYYAHGLDNP  120
TFVRRCYWLL DKYQSQNSPA TPVNSNSSSI SDPPASWPLS EEFDSGANQT LYHLEKHVTV  180
PDDSLTYKSH EMQLHEINTL EWDELVTDDS NNFGAPRGGS ISHSDQQYIA EHKVSLLVES  240
SRLGDLSDSV TKMGFQVESK RDSELGTNNP MEVLVNDGLQ SQDSFGRWMN RIITDSPGSV  300
DDALIESSLS FSCYSSGSSQ VDIQQSPGPG QIFSITDVSP SSVLSNEKTK ILVTGFFQEG  360
YLHLSKSNLF CITGDVCVPA EIIQVGVYRC LLTPQPAGLV NLYLSFDGHK PISQVLNFEY  420
RDPPPHASAV ESSNEEKIEQ EFLVQMRLAK LLLSTPKCLD IASSKISPST LKEGRKFASK  480
TSNLMKSWEY LIKLVEDEKA SFARAKESLF ELMLKSRLRE WLLERLVGGF KSSELDSRGQ  540
GVIHLCAILG YTWSVQLFSW SSLSLDFRDK FGWTALHWAA YYGREKMVAS LLSAGAKPNL  600
VTDPTPENPG GSTAADLASR NGHEGLAAYL AEKGLVQHFK DMSLAGNISG SLSDSYDASA  660
LSALANENNN LTEDELYLKD TLAAYRTAAD AAGRIQSAFR EHSLKIRSKH VQFLNPEEEA  720
RSIIAAMKIQ HAFRNYEVKK QMVAASRIQH RFRTWKLRRE FLNMRRHAIK IQAAFRAFQA  780
RRQYVKIVWS VGVLEKAILR WRLKRKGFRG LPSDPLVPDQ TTQQSDTEED FFQVSRRQAE  840
ERVEQSVVRV QAMFRSKKAQ EEYRRMKLAH VEAEAPKPCP GLWLLLIEVG SSLFEASLAL  900
LGLAHLGFGI IAAKHEPYGL SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein