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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | WOX | ||||||||
Protein Properties | Length: 181aa MW: 20657.4 Da PI: 9.7166 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.1 | 9.9e-21 | 28 | 89 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF+ r+ps++++++++++l +++ ++V++WFqN++a+e++ OWM69979.1 28 KCGRWNPTTEQVKVLTDLFRAgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 89 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.7 | 9.5e-37 | 28 | 91 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l+++GlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ OWM69979.1 28 KCGRWNPTTEQVKVLTDLFRAGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 91 678***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MEEGLSGRFY IKAAGGVRGS GGGGGGTKCG RWNPTTEQVK VLTDLFRAGL RTPSTDQIQK 60 ISSQLSFYGK IESKNVFYWF QNHKARERQK RRKVSVDEKD VNIRREEKIP QPKYFAEVTN 120 HVVEPAADRV IQTLQLFPIT SFDEPEPAEK LRLRVGECRE FAHTFVSDID HPPLDLRLSF 180 F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 2e-50 | WOX family protein |