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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM69570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | WRKY | ||||||||
Protein Properties | Length: 326aa MW: 36169.5 Da PI: 8.3374 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.1 | 1e-29 | 164 | 223 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+ OWM69570.1 164 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSVLVATYEGEHNHP 223 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MEYSSWINTS LDLNIKPLRL LDDAPPPKKE AESDFMELAG RKVSVKEETG ALMEELNRVS 60 AENRKLTQML TVVCENYNAL RSQVMEYMSK NADKSSDLSP SRKRKSESIS NNDANNYGAM 120 VANGTSESSS TDDDSSKNPR EEKITAKISR MYVRTEPSDT SLIVKDGYQW RKYGQKVTRD 180 NPCPRAYFKC SFAPTCPVKK KVQRSVEDQS VLVATYEGEH NHPSPSQADQ ETSGSTRCVT 240 TLGSVPCSTA LNSSGPTITL DLTKSKSSNE IKTPPRPKVE SPEFQRFLVE QMASSLTKDP 300 SFTSALAAAI SGRIQLHQSP TEKWSK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 106 | SRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 7e-98 | WRKY family protein |