PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65636.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CAMTA

Protein Properties

Length: 1078aa MW: 120817 Da PI: 5.5927

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.5	9.9e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 l+ ++rwl++ ei++iL+n++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+e+n++fqrrcyw OWM65636.1 20 LEAQRRWLRPAEICEILQNYKKFRIAPEPASMPRSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDNENFQRRCYW 118 56799******************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 lLeee+++ivlvhylevk OWM65636.1 119 LLEEEHSNIVLVHYLEVK 136 *************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1078 aa Download sequence
MADTRRYGAS NQPDIRQILL EAQRRWLRPA EICEILQNYK KFRIAPEPAS MPRSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRCYWLL 120 EEEHSNIVLV HYLEVKGNRM NIHRIRESEE VIANSQETGP AASYENDTSL SYDLHEDNYQ 180 LRPEATDTTA STSCQASEYE DTESAYDNQA SSIFHSVAAY QQNAGMEKVD SRVSDHCYSV 240 ARSNDYQENL SVIPGMNFLS LTPAEFDSDS NDGGLTFEGR IHLDLSTWDE VLGNYAPGRE 300 PLPAPPLFSS ADVETPGTTL RQGDDTLGLL FADSFDKKQE PGSHSSVQEE SQWLEDHKLH 360 SNSVYHPPSR FQEEEVNHVT SKQNAENSNA GNGYLVMPET SSDVIAEGKA SQSSLKQPFS 420 DILLAEDGLK KMDSFNRWMS KELGDVSDIH MQSSSGAYWD TVEGETGVDS SISSQELENA 480 FMLSPSLSHD QLFSIMDFSP IWGYANSEIK VLITGRFLRS HEEVAACQWS CMFGEVEVPA 540 EVIADGVLRC RAPAHKVGRV PFYVTCSNRL ACSEVREFEF RVNQKDTENI NNESMNEILK 600 MRFAKLLSLS SVPRPNSDLG SLNEKSQLSA KICPLLKEDS CGWDQMLQLP EEEFSLEKMK 660 EQLLQKLLKE NLYAWLLEKV AEGGKGASVL DEEGQGVLHF AAALGYDWAL QPTILAGVSV 720 NFRDLKGWTA LHWAAYCGRE RTVASLMSLG AAPGALTDPT PKYPGGRTPA DLASSNGHKG 780 IAGYLAVSAL RAQLSSLDLD KKEAEVSVSS RGKAVQTISE RSPTPCGAGD LPSGLSLKDS 840 LAAVCNATQA AARIHQVFRV QSFQRKLLKE YSDNKFGISN ERALSMVAVK GSKLGQIDDS 900 AHVAAIRIQN KYRGWKRRKE FLTIRRQIVK IQAHVRGHQV RKNYKKITWS VGILEKVILR 960 WRRKGSGLRG FKSEALAESS SSMVDATSSN GDDFDLLKEG RKQTEERVQK FLARVKSMVR 1020 YPEARDQYSR LLNVVNEIQE AQTSHEMASE SYEETAYFDD VINIEDLLDD DSFMPMTS

Sequence ? help Back to Top

Protein Sequence Length: 1078 aa Download sequence

MADTRRYGAS NQPDIRQILL EAQRRWLRPA EICEILQNYK KFRIAPEPAS MPRSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRCYWLL  120
EEEHSNIVLV HYLEVKGNRM NIHRIRESEE VIANSQETGP AASYENDTSL SYDLHEDNYQ  180
LRPEATDTTA STSCQASEYE DTESAYDNQA SSIFHSVAAY QQNAGMEKVD SRVSDHCYSV  240
ARSNDYQENL SVIPGMNFLS LTPAEFDSDS NDGGLTFEGR IHLDLSTWDE VLGNYAPGRE  300
PLPAPPLFSS ADVETPGTTL RQGDDTLGLL FADSFDKKQE PGSHSSVQEE SQWLEDHKLH  360
SNSVYHPPSR FQEEEVNHVT SKQNAENSNA GNGYLVMPET SSDVIAEGKA SQSSLKQPFS  420
DILLAEDGLK KMDSFNRWMS KELGDVSDIH MQSSSGAYWD TVEGETGVDS SISSQELENA  480
FMLSPSLSHD QLFSIMDFSP IWGYANSEIK VLITGRFLRS HEEVAACQWS CMFGEVEVPA  540
EVIADGVLRC RAPAHKVGRV PFYVTCSNRL ACSEVREFEF RVNQKDTENI NNESMNEILK  600
MRFAKLLSLS SVPRPNSDLG SLNEKSQLSA KICPLLKEDS CGWDQMLQLP EEEFSLEKMK  660
EQLLQKLLKE NLYAWLLEKV AEGGKGASVL DEEGQGVLHF AAALGYDWAL QPTILAGVSV  720
NFRDLKGWTA LHWAAYCGRE RTVASLMSLG AAPGALTDPT PKYPGGRTPA DLASSNGHKG  780
IAGYLAVSAL RAQLSSLDLD KKEAEVSVSS RGKAVQTISE RSPTPCGAGD LPSGLSLKDS  840
LAAVCNATQA AARIHQVFRV QSFQRKLLKE YSDNKFGISN ERALSMVAVK GSKLGQIDDS  900
AHVAAIRIQN KYRGWKRRKE FLTIRRQIVK IQAHVRGHQV RKNYKKITWS VGILEKVILR  960
WRRKGSGLRG FKSEALAESS SSMVDATSSN GDDFDLLKEG RKQTEERVQK FLARVKSMVR  1020
YPEARDQYSR LLNVVNEIQE AQTSHEMASE SYEETAYFDD VINIEDLLDD DSFMPMTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein