PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM62637.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WOX

Protein Properties

Length: 412aa MW: 46525.4 Da PI: 6.9512

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM62637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.4	9.3e-22	91	150	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ OWM62637.1 91 SRWNPTPEQLRTLEELYRRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 150 7***************99************************************97 PP
2	Wus_type_Homeobox	115.5	2.5e-37	90	152	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ OWM62637.1 90 SSRWNPTPEQLRTLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 152 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MWMMGYNDGG DLYMADSCNG RKLRPLIPRP ISAAATPNGG GGPGITSPPT GFGRPHHGGT 60 DVFSLNPNHI GMASEQSKRE FNPQHQVVVS SRWNPTPEQL RTLEELYRRG TRTPSADQIQ 120 HITAQLRRYG KIEGKNVFYW FQNHKARERQ KRRRQMESDD HQNINGSVPH EIETLGRKES 180 EAGGAEGASK TVFGVDHHHH QTNKNTTNNS SNNWASPMNC STLAEETAPS TVHKTVKAAG 240 GVLEHKSSSF EQHHQWMKID DAGDHPPQCR RSVNDMWQMM QHHQQSFPPP PATHLINTPR 300 MDPKLTDSNK SPSNHHLTRF LIAPPPPPPP FYSIRPYHEE IFINSHLHNV SDEDEGDQED 360 DGEYENSQTL QLFPLRSGDS YANEKETEMS VSAINSFVAH PHQFFEFLPL KN

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MWMMGYNDGG DLYMADSCNG RKLRPLIPRP ISAAATPNGG GGPGITSPPT GFGRPHHGGT  60
DVFSLNPNHI GMASEQSKRE FNPQHQVVVS SRWNPTPEQL RTLEELYRRG TRTPSADQIQ  120
HITAQLRRYG KIEGKNVFYW FQNHKARERQ KRRRQMESDD HQNINGSVPH EIETLGRKES  180
EAGGAEGASK TVFGVDHHHH QTNKNTTNNS SNNWASPMNC STLAEETAPS TVHKTVKAAG  240
GVLEHKSSSF EQHHQWMKID DAGDHPPQCR RSVNDMWQMM QHHQQSFPPP PATHLINTPR  300
MDPKLTDSNK SPSNHHLTRF LIAPPPPPPP FYSIRPYHEE IFINSHLHNV SDEDEGDQED  360
DGEYENSQTL QLFPLRSGDS YANEKETEMS VSAINSFVAH PHQFFEFLPL KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	5e-52	WOX family protein