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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA20496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB | ||||||||
Protein Properties | Length: 414aa MW: 47198.3 Da PI: 8.1658 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.8 | 2.5e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+t+++ g+ R++k+c++rw +yl OVA20496.1 14 RGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ ++++++ +lG++ W++Ia+ ++ gRt++++k++w++ OVA20496.1 67 RGAFTEMEENQIIQLHSRLGNR-WSKIAANFP-GRTDNEIKNHWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MGRQPCCEKI GLKRGPWTIE EDHKLMNFIL NNGIHCWRTV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAF TEMEENQIIQ LHSRLGNRWS KIAANFPGRT DNEIKNHWNT RIKKRLKQLG 120 LDPVTHKPIE HSGKCETSKD DEQNLDVEQV DIPISEDDFP VITQKKEDEF EFGSSGDDDT 180 NCINLLFHQS HEMLWNNYGG FDMGSASLMN NKPIMTTNNC SSSFSLEDSS LNNNNNNPSV 240 NNNGEISSSS LQQEEYSDQP ATTNCWIDTS SRADLGFAMY ALQRALRSIH TTVQPPRLTK 300 LSLQPPKAVE VEFADGSVFN LSAEFLRVHS PAVDSKIRSV GGEKVIYGRR HVGIMSAEPV 360 GNYGIRIAFD DLHKTGIYTW DYFYHLGSNK FTLMKNYIKT LKKHGLSRDP QRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 8e-81 | MYB family protein |