PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20496.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB
Protein Properties Length: 414aa    MW: 47198.3 Da    PI: 8.1658
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.82.5e-131461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G ++W+t+++  g+ R++k+c++rw +yl
       OVA20496.1 14 RGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLMRCGKSCRLRWINYL 61
                     89********************************************97 PP

2Myb_DNA-binding54.52.7e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T+ E+ ++++++ +lG++ W++Ia+ ++ gRt++++k++w++
       OVA20496.1  67 RGAFTEMEENQIIQLHSRLGNR-WSKIAANFP-GRTDNEIKNHWNT 110
                      89********************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MGRQPCCEKI GLKRGPWTIE EDHKLMNFIL NNGIHCWRTV PKLAGLMRCG KSCRLRWINY  60
LRPDLKRGAF TEMEENQIIQ LHSRLGNRWS KIAANFPGRT DNEIKNHWNT RIKKRLKQLG  120
LDPVTHKPIE HSGKCETSKD DEQNLDVEQV DIPISEDDFP VITQKKEDEF EFGSSGDDDT  180
NCINLLFHQS HEMLWNNYGG FDMGSASLMN NKPIMTTNNC SSSFSLEDSS LNNNNNNPSV  240
NNNGEISSSS LQQEEYSDQP ATTNCWIDTS SRADLGFAMY ALQRALRSIH TTVQPPRLTK  300
LSLQPPKAVE VEFADGSVFN LSAEFLRVHS PAVDSKIRSV GGEKVIYGRR HVGIMSAEPV  360
GNYGIRIAFD DLHKTGIYTW DYFYHLGSNK FTLMKNYIKT LKKHGLSRDP QRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.18e-81MYB family protein