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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA18000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB | ||||||||
Protein Properties | Length: 355aa MW: 39974.7 Da PI: 7.3094 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.1 | 5.3e-10 | 50 | 90 | 9 | 48 |
HHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 d++l++ ++++G+g +W + +++ g++R++k+c++rw++yl OVA18000.1 50 DLKLKQFIEKYGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 90 789************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.4 | 5.9e-12 | 97 | 139 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ OVA18000.1 97 GEFSDDEDRIICSLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 139 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MKETSNLPIG KTKELGVQKA CTEFSPNAAH LARERERERE EEEVLPPQKD LKLKQFIEKY 60 GTGGNWIALP HKAGLKRCGK SCRLRWLNYL RPNIKHGEFS DDEDRIICSL FASIGSRWSI 120 IAAQLPGRTD NDIKNYWNTK LKKKLMATML PFSHTNLITQ PLFQSSLQTA SSPSPSTFYH 180 STLTHPKPIL VPSNFLTNNK TTTETIINTS PHQLQVQESN LMGPIHHYQV KATSSPQVLG 240 GDQPSCSSSD GSTSNNQFSY CTGFNNGTDQ QMGFEGYFIN NGVEEDHKSS ILGDGFSVNY 300 DQWSTERQNG LWGETQSDHQ FTLEEFKQLV SSTPSNGCNN LFMDESKTQG KLMYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 7e-56 | MYB family protein |