PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16111.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 393aa MW: 45025.4 Da PI: 9.5816

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	7.1e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++I+++mg + R k+c +rw +yl OVA16111.1 4 RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGkpLLRDSKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	31.9	3.1e-10	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T eE+ l + + ++G++ Wk+Ia+ ++ gRt+k + +w + OVA16111.1 59 KGSLTLEEQNLVISLQSKYGNK-WKKIASLVP-GRTAKRLGKWWEVF 103 57789***************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MKERQRWQPE EDALLRAYVK QYGPKEWNLI SQRMGKPLLR DSKSCLERWK NYLKPGIKKG 60 SLTLEEQNLV ISLQSKYGNK WKKIASLVPG RTAKRLGKWW EVFKEKQLKL KNSTTPQIPP 120 SSSTAAITTG SSSITNEVEK NSSFQGKYDH ILETFAEKYV QPKLLQRLQQ QPTVSQQSLD 180 FHSPHSVLMP NLSLGCCSVS TINDSTLAAA SSSSSVLPPW MSTPNMGTSS LSSSSSTTPS 240 PSVSLTLSSS EPPPPPPPPP SVFDLGTQFL SLHQMGMLVQ YCRELEERRQ NWVQHKKEAN 300 WRLSRLEQQL EAEKARKRRE IMEEFESKFR CLREEEMSYF ERIESECRDQ LSAIQRDAEI 360 QEAKMVEIWC SKHVKLAKIV ECMRGSIHHQ HFN

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MKERQRWQPE EDALLRAYVK QYGPKEWNLI SQRMGKPLLR DSKSCLERWK NYLKPGIKKG  60
SLTLEEQNLV ISLQSKYGNK WKKIASLVPG RTAKRLGKWW EVFKEKQLKL KNSTTPQIPP  120
SSSTAAITTG SSSITNEVEK NSSFQGKYDH ILETFAEKYV QPKLLQRLQQ QPTVSQQSLD  180
FHSPHSVLMP NLSLGCCSVS TINDSTLAAA SSSSSVLPPW MSTPNMGTSS LSSSSSTTPS  240
PSVSLTLSSS EPPPPPPPPP SVFDLGTQFL SLHQMGMLVQ YCRELEERRQ NWVQHKKEAN  300
WRLSRLEQQL EAEKARKRRE IMEEFESKFR CLREEEMSYF ERIESECRDQ LSAIQRDAEI  360
QEAKMVEIWC SKHVKLAKIV ECMRGSIHHQ HFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	3e-92	MYB family protein