PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14922.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 932aa MW: 102636 Da PI: 6.747

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	132.9	1.3e-41	769	869	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC++dC++apyfp+++p++fa+vhk+FGasn++k+lk+lp ++r++a++sl +eA+ r++dP+yG+vg+i+ lqqq+++++++la++++ OVA14922.1 769 RCAACKYLRRKCPSDCIFAPYFPSNNPQRFAYVHKIFGASNISKMLKQLPVHQRTEAANSLHFEAQLRVQDPIYGSVGIISFLQQQIHSTQHQLAETRA 867 6***********************************************************************************************998 PP DUF260 100 el 101 ++ OVA14922.1 868 QI 869 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
MAGKSWFGSS GNASFNMIVT NTPASDLALT NFAYCSASDF NKFLIPGSKL ALALVATLLA 60 TSVELADFPA KGGHTVHESI RDGHIALNAI QRRHAKVSTG DAVSASRFVP PDNFYLALLT 120 LELEFVKKGT KSEQIDAVLL AQQLRKRFLN QVMTAGQRVS FEYHGTNYIF TVSQAAVEGQ 180 EKSNTLERGM ISNDTYFVFE ASNASGIKIV NQREAASSNI FRQKEFNLQS LGIGGLSAEF 240 ADIFRRAFAS RVFPPHVTNK IGIKHVKGML LYGPPGTGKT LMARQIGKML NGKEPKIVNG 300 PEVLSKFVGE TEKNVRDLFA DAENDQRTLG DQSDLHVIIF DEIDAICKSR GSTRDGTGVH 360 DSIVNQLLTK IDGVESLNNV LLIGMTNRKD LLDEALLRPG RLEVQVEISL PDENGRLQIL 420 QIHTNKMKEN SFLAPDVNLQ ELAARTKNYS GAELEGVVKS AVSYALNRQL SLDDLTKPVD 480 EESIKVTMDD FLHALHEIVP AFGASTDNLE RCRLNGMVDC GERHKHIYQR AMLLVEQVKV 540 SKGSPLVTCL LEGPSGSGKT AMAATVGIDS DFAYVKIISA ETMIGLSESS KCAQIVKVFE 600 DAYKSQLSII VLDDIERLLE YVAIGPRFSN LISQTLLVLL KRLPPKGKNI LVIGTTSELD 660 FLESLGICDA FSVTYHVPKL RSADAKKVLE QLNVFAEEDI DAAAEALNDM PIKKLYMLIE 720 MAVQGEQGGS AEAIYSGKEK ININHFFDCL GDIILIGFST NKKIMNSSRC AACKYLRRKC 780 PSDCIFAPYF PSNNPQRFAY VHKIFGASNI SKMLKQLPVH QRTEAANSLH FEAQLRVQDP 840 IYGSVGIISF LQQQIHSTQH QLAETRAQIA LTAQADHQVH LQRAGISDHD EFQQVGIPTH 900 TVFNNTLQEP FSVDQLFLDP SIIQPPGIFK EK

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

MAGKSWFGSS GNASFNMIVT NTPASDLALT NFAYCSASDF NKFLIPGSKL ALALVATLLA  60
TSVELADFPA KGGHTVHESI RDGHIALNAI QRRHAKVSTG DAVSASRFVP PDNFYLALLT  120
LELEFVKKGT KSEQIDAVLL AQQLRKRFLN QVMTAGQRVS FEYHGTNYIF TVSQAAVEGQ  180
EKSNTLERGM ISNDTYFVFE ASNASGIKIV NQREAASSNI FRQKEFNLQS LGIGGLSAEF  240
ADIFRRAFAS RVFPPHVTNK IGIKHVKGML LYGPPGTGKT LMARQIGKML NGKEPKIVNG  300
PEVLSKFVGE TEKNVRDLFA DAENDQRTLG DQSDLHVIIF DEIDAICKSR GSTRDGTGVH  360
DSIVNQLLTK IDGVESLNNV LLIGMTNRKD LLDEALLRPG RLEVQVEISL PDENGRLQIL  420
QIHTNKMKEN SFLAPDVNLQ ELAARTKNYS GAELEGVVKS AVSYALNRQL SLDDLTKPVD  480
EESIKVTMDD FLHALHEIVP AFGASTDNLE RCRLNGMVDC GERHKHIYQR AMLLVEQVKV  540
SKGSPLVTCL LEGPSGSGKT AMAATVGIDS DFAYVKIISA ETMIGLSESS KCAQIVKVFE  600
DAYKSQLSII VLDDIERLLE YVAIGPRFSN LISQTLLVLL KRLPPKGKNI LVIGTTSELD  660
FLESLGICDA FSVTYHVPKL RSADAKKVLE QLNVFAEEDI DAAAEALNDM PIKKLYMLIE  720
MAVQGEQGGS AEAIYSGKEK ININHFFDCL GDIILIGFST NKKIMNSSRC AACKYLRRKC  780
PSDCIFAPYF PSNNPQRFAY VHKIFGASNI SKMLKQLPVH QRTEAANSLH FEAQLRVQDP  840
IYGSVGIISF LQQQIHSTQH QLAETRAQIA LTAQADHQVH LQRAGISDHD EFQQVGIPTH  900
TVFNNTLQEP FSVDQLFLDP SIIQPPGIFK EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26620.1	2e-48	LBD family protein