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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA14115.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB | ||||||||
Protein Properties | Length: 652aa MW: 71043.6 Da PI: 8.2268 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.6e-17 | 60 | 106 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed l +avk++Gg++Wk+Ia ++ +Rt+ qc +rwqk+l OVA14115.1 60 KGGWTELEDNMLTNAVKLYGGKNWKKIATRLK-NRTDVQCLHRWQKVL 106 688****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 59.6 | 6.6e-19 | 112 | 158 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+l++++v++ G++ W+ Ia+ ++ gR +kqc++rw+++l OVA14115.1 112 KGPWTKEEDDLIIELVEKNGSKKWSVIAQSLP-GRIGKQCRERWHNHL 158 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 50 | 6.6e-16 | 164 | 206 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eE+ l++a++ +G++ W+ Iar ++ gR ++++k++w+ OVA14115.1 164 KDAWTNEEEVTLIRAHQIYGNK-WAEIARFLP-GRADNSIKNHWN 206 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 652 aa Download sequence |
MEEVKQEEAN SCSTKEVTIA ASSSSVSDSS CDTSLPKLAT VQGCSLISKR TTGPTRRSKK 60 GGWTELEDNM LTNAVKLYGG KNWKKIATRL KNRTDVQCLH RWQKVLNPEL VKGPWTKEED 120 DLIIELVEKN GSKKWSVIAQ SLPGRIGKQC RERWHNHLNP AIKKDAWTNE EEVTLIRAHQ 180 IYGNKWAEIA RFLPGRADNS IKNHWNCSVK KKLDTYSASG FAGDLPGVKA LDLSNHETKL 240 DFVKVDVASQ SPGTVVSYDK KMDLCGGAPT CLVGSALGNS NDGDKDLQLQ PLQATNSRAS 300 LQQVNYPTKQ VQCDGRCATA SGPVSEKHED DTNNGSKPDD LKLSIFCLST PIPSSDNVSS 360 TPSSSIRLLD LNSGSGRKNY ITPSETEPCV TAKRLPESPK RPKHCSPSPN SSGGMDLRPN 420 LDSNSPFSSS LACEFGNYSV QVGRQSKVHG ASKCSDGTHF GRLCYEPPQL MNSDIFFEKG 480 RLSSISPVCS TPPSRVRTIS VDCSSPESVL RSAAKSFKNT PSIIRKRGRE ICGWAPYASD 540 SDGVCTPEVR PQRSNDMKGF MESSPHAHSG QEDLDSRGLL NVQWLSLSSS NSLKRETAAA 600 VKSVRLEYAF DLECDDSRAK YGTSVAASDA SDASCDANTG LMPRPQLELN IS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 1e-89 | MYB family protein |