PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13384.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 302aa MW: 34328.4 Da PI: 8.2138

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l+d++k +G g W+ + + g++R++k+c++rw++yl OVA13384.1 14 RGAWTATEDKILIDYIKIHGEGGWRNLPLKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.6	4.3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ OVA13384.1 67 RGNISNDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSN 111 78899***************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGRSPCCSKE GLNRGAWTAT EDKILIDYIK IHGEGGWRNL PLKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SNDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS NLAKKIQDQS 120 TSNSTRKNTN QSKEKKKSST GTSIEARSKP KIESHVVRTK ALRCTKLFFT PQAQNVEPLG 180 TNRSVGPSMI HYKALKSEPR NGFSSFPLGE NYLRSSNFVM NFNNGEHCIL SDFSHLCNFD 240 GENTTDEFSP TSDDSLWFFD EMLHNWTGDD TCAHYQVQPD VTSDIQSLVT GVDSEEDWFG 300 DQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	3e-62	MYB family protein