PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12383.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 182aa    MW: 19951.5 Da    PI: 8.4115
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260145.51.5e-45151141100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l++lp ++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la +++
  OVA12383.1  15 PCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQA 113
                 7**********************************************************************************************9987 PP

      DUF260 100 e 100
                 e
  OVA12383.1 114 E 114
                 6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MKENTSRKGG GAASPCAACK LLRRRCAQDC VFAPYFPADE PQKFANVHKV FGASNVNKML  60
QELPVHQRGD AVSSMVYEAN ARVRDPVYGC VGAISSLQQQ IDVLQTQLAI AQAEVVHMRM  120
RQTASSISNN DHHHHHHHHH NEHHSASPNS SSKLITPHST KSLLALDMVV DQASMGASLW  180
SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.14e-77LBD family protein