PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09830.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 452aa MW: 50853.9 Da PI: 7.2496

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.1e-16	140	185	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ OVA09830.1 140 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 185 899***************************.*********996 PP
2	Myb_DNA-binding	56.9	4.8e-18	192	235	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+++l da++++G++ W+ Iar ++ gRt++++k++w+ OVA09830.1 192 RRAFSEEEEQRLMDAHRLYGNK-WAMIARLFP-GRTDNSVKNHWHV 235 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MNMTKKFIYA LENFHGHINS YSSFPSPPPP PFGSSSSMGL FADISSLSIN GVNSVGSSSQ 60 ENTYYCKDDH KRSFWTFPLT EDPQHSEGGD GKVTDYSSDG SGVNNAAMED NQNKNEENPN 120 ENSMDGSKDF DNGQSKICAR GHWRPAEDSK LKELVALYGP QNWNLIAEKL EGRSGKSCRL 180 RWFNQLDPRI NRRAFSEEEE QRLMDAHRLY GNKWAMIARL FPGRTDNSVK NHWHVIMARK 240 YREQSSAYRR RKLGQAVHGR LDEGSSFDCR DTNVTRLTEP NSSDFRNRSF NTTSPFPSAL 300 MISNGREDSV SSCREVLLGC SINKKFPAPP SGFCADHHQI PPFDFFSGPK NQDIGSSFNQ 360 IRCWERPRND SNFTCFNPFY HSPQMMSMQQ SNHQYHTTSH YSDSKTSTSH VSVTEASSSS 420 SASTVADNNR VTSHCDTTIT PPFIDFLGVG AT

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MNMTKKFIYA LENFHGHINS YSSFPSPPPP PFGSSSSMGL FADISSLSIN GVNSVGSSSQ  60
ENTYYCKDDH KRSFWTFPLT EDPQHSEGGD GKVTDYSSDG SGVNNAAMED NQNKNEENPN  120
ENSMDGSKDF DNGQSKICAR GHWRPAEDSK LKELVALYGP QNWNLIAEKL EGRSGKSCRL  180
RWFNQLDPRI NRRAFSEEEE QRLMDAHRLY GNKWAMIARL FPGRTDNSVK NHWHVIMARK  240
YREQSSAYRR RKLGQAVHGR LDEGSSFDCR DTNVTRLTEP NSSDFRNRSF NTTSPFPSAL  300
MISNGREDSV SSCREVLLGC SINKKFPAPP SGFCADHHQI PPFDFFSGPK NQDIGSSFNQ  360
IRCWERPRND SNFTCFNPFY HSPQMMSMQQ SNHQYHTTSH YSDSKTSTSH VSVTEASSSS  420
SASTVADNNR VTSHCDTTIT PPFIDFLGVG AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26780.1	6e-75	MYB family protein