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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA03384.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB | ||||||||
Protein Properties | Length: 450aa MW: 49634.2 Da PI: 6.2962 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 31 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+++vk++G g+W+++ + g+ R++k+c++rw ++l OVA03384.1 31 KGPWTAAEDAILIEYVKKHGEGNWNAVQKNSGLSRCGKSCRLRWANHL 78 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.5e-16 | 84 | 127 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE++l+++++++lG++ W++ a+ ++ gRt++++k++w++ OVA03384.1 84 KGSFSPEEEKLILELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 127 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MINNNGVLVA RSDDLSPDHG EDGGSGVGLK KGPWTAAEDA ILIEYVKKHG EGNWNAVQKN 60 SGLSRCGKSC RLRWANHLRP NLKKGSFSPE EEKLILELHA KLGNKWARMA AQLPGRTDNE 120 IKNYWNTRVK RRQRAGLPLY PQDIQKQAVA FHLHHPNQTR PSLSPPPPLT QQFSSSHQRK 180 PNLFSSPLSL FNPTSISTTS FLPSQFHEFK RFRGNNNFGF TPPVSLSNNP QPQSSLFSPN 240 FSNQLQPSST FQFNSGNFDL NPPPIVQTPI EPDGLVGSGS IFPIKVQLPS IQLPQQAANT 300 ADSGATGDYK LTKSNSGLLD ALLEEAQAMA SSEDSKRENK RELDQLFHDA LASESAFSQN 360 EMKLKEEPKD EINSVDDELS SLLNIIPPTM SMAEWGYSDS GEISNGQSSG LTEDDIGLEM 420 KHVASSLPAS NTSDQDYWNL TNWNNMPGIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26930.1 | 2e-77 | MYB family protein |