PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02562.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 396aa MW: 44037.9 Da PI: 4.6778

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02562.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw++yl OVA02562.1 14 KGRWTAEEDEILMKYIQHNGEGSWRSLPKNAGLLRCGKSCRLRWLNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.5	1.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +teE+ l+++++ lG++ W++Ia +++ gRt++++k++w+++l OVA02562.1 67 RGNISTEEETLIIKLHSSLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGRAPCCEKV GLKKGRWTAE EDEILMKYIQ HNGEGSWRSL PKNAGLLRCG KSCRLRWLNY 60 LRTDLKRGNI STEEETLIIK LHSSLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRRIDSFR 120 RPSSEAAAAA LPIIMNLAKM GGGCKRKGGR TSRAAMKKNN YNYNNQSNVK LMTTTDSTPD 180 HIGACQQGRA SMTTDQEKNT STIMNNQIAV QNYEERQSMT VDPFVERKSV VFCSSDEEKL 240 ESPGLGLCPN TEEEERGINR MLGPIEQLET EIMCPNDIMG DGVVVDSNGL LTFTDDTENG 300 GFMSFDEERE SGVLGSNIKT TSGEGGEMAA STSTTGGLSY NCNGDQTGEW YSSASNSNIT 360 TSCFEDEWVA DWDWVGVVEG HNLWEDGEEM LSWLEE

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGRAPCCEKV GLKKGRWTAE EDEILMKYIQ HNGEGSWRSL PKNAGLLRCG KSCRLRWLNY  60
LRTDLKRGNI STEEETLIIK LHSSLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRRIDSFR  120
RPSSEAAAAA LPIIMNLAKM GGGCKRKGGR TSRAAMKKNN YNYNNQSNVK LMTTTDSTPD  180
HIGACQQGRA SMTTDQEKNT STIMNNQIAV QNYEERQSMT VDPFVERKSV VFCSSDEEKL  240
ESPGLGLCPN TEEEERGINR MLGPIEQLET EIMCPNDIMG DGVVVDSNGL LTFTDDTENG  300
GFMSFDEERE SGVLGSNIKT TSGEGGEMAA STSTTGGLSY NCNGDQTGEW YSSASNSNIT  360
TSCFEDEWVA DWDWVGVVEG HNLWEDGEEM LSWLEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-73	MYB family protein