![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA02444.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 246aa MW: 27676.8 Da PI: 5.2214 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.9 | 8e-39 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp +r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk OVA02444.1 7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPVADRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLK 105 7*************************89********************************************************************998 PP DUF260 99 ee 100 ++ OVA02444.1 106 AQ 107 76 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 246 aa Download sequence |
MTGFGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPVAD 60 RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LASLKAQQAA QGFVNGSSNS 120 RPDQEDKLFY GDHFPTYPQD IQALNIHLNE AKISQQLYQN PSVNDIDQTM FYYENEVMDS 180 NQISSDYYEH STTPEETMQF STTSFEDSSH AAMASIDMQM NNARKWLFQD TEDLQSMAFA 240 YFQHSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58190.1 | 7e-56 | LBD family protein |