PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00635.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 1206aa MW: 135674 Da PI: 6.7682

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.8	9.2e-12	507	551	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+++d +l av+ +G ++W +Ia + gRt+ qc +rw k OVA00635.1 507 RDWTKDDDTQLRAAVEAFGENDWQLIAFNLE-GRTGTQCSNRWIKT 551 57***************************.*********987 PP
2	Myb_DNA-binding	54.4	2.9e-17	560	604	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grWT eEd++l+ av ++G++tW +Ia+ ++ gRt qc++rw + OVA00635.1 560 GRWTVEEDKRLKVAVMLFGPKTWQKIAQFVP-GRTQVQCRERWVNC 604 8****************************.*********986 PP
3	Myb_DNA-binding	43.4	7.7e-14	613	656	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd +l+ a++++G W+++a+ ++ Rt+ qc+ rw +l OVA00635.1 613 EWTEEEDCKLKAAIAEYGHC-WSKVAASVP-PRTDSQCRRRWKVLL 656 6***************99.*****.9********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1206 aa Download sequence
MGLSSHRDET DRTEETSEED EDDEAFDEDM EALRRACMLT GTNPDEIKDA TGTNITSPTT 60 SGSVGRSDDE DDLELVRNIQ QRFSIPSDAN QPLILKPLSS LPPVVSDDEE DDFETLRAIE 120 RRFSKYDSYA LKKNADNDLN KSESVCGTGI SLEQGTPSVL FAERNNAEVL GEELSNSGKT 180 CNVDQPSNFI EWHQSKATRS STLPLKYSGF PNPEAAEVFI NAIKKNRSCQ KFIRSKLIQI 240 EARIEENKRL KERVKVLKDF QVACRKRAGR ALSQRKDARV QLISVRKSKN SPTMKVNHKK 300 APALSFGPVE NSHVANYRIV LKRFPLSLSR QRWSETDKEN LWKGIKQQFQ EMLLQKSVEV 360 CGYVLYGDVT FENNVPGAYF LPNTCFRDSA SGDSNILDDI IASITNFEIT PVNIRYFLPK 420 VDWERLASTY VVGRSGAECE QRWLNIEDPL INHNPWTKPE DKKLLFILQQ GGIYNWINIS 480 ITLGTNRTPF QCLARYQRSL NSNIMKRDWT KDDDTQLRAA VEAFGENDWQ LIAFNLEGRT 540 GTQCSNRWIK TLHPARKRVG RWTVEEDKRL KVAVMLFGPK TWQKIAQFVP GRTQVQCRER 600 WVNCLDPSLN LEEWTEEEDC KLKAAIAEYG HCWSKVAASV PPRTDSQCRR RWKVLLPHEV 660 PLVQAARKIQ KAALISNFVD REAERPALDP TDFLSLPGTN SISEPENGKN IGKEKKSRGK 720 PKSKKTKDVT SCDAAPKNIS SERSRTEGET CHERNSRIQH VEDVETCGEE GTVLKEKKRA 780 PNKRFKMNQC TKPAPCDQDI PFLPEDSNIL RITDVDNIEN SAEDGTVSRK RKRAPKSCLK 840 KNQCTNPTPG NQDIPPFPDD SSILRITSGD DNTENCGDDG TILVKKKRAP NRRVKRNQCT 900 NPVPGNQDIP LFPEDSTILR ITNGDDNIEN CDEDGTVMGK KKRAPNKRLR RNQCTHPDPG 960 NQEVPLLLED STILKKTEGD DNIENCGEDA TVSGKKKRAP KRRLKTNQGA NTFSGNQDTP 1020 LLPEDSTILR ITNGDEHIET CGEVYTGSRK RKMAPNKRLK GNQHTEQAAG NQDILLCPED 1080 STIRITDVND NIESFGEEGN ISSMKNNNKK KRPKSHSKRN TSTDQPVQDQ EDLSLPPDDS 1140 ASLQVTNCEN IQTIGGVDAH SRDQDVQDQQ DLSLPPDNST SLQVTNSDDI QTIGGVGARS 1200 SDQGPS

Sequence ? help Back to Top

Protein Sequence Length: 1206 aa Download sequence

MGLSSHRDET DRTEETSEED EDDEAFDEDM EALRRACMLT GTNPDEIKDA TGTNITSPTT  60
SGSVGRSDDE DDLELVRNIQ QRFSIPSDAN QPLILKPLSS LPPVVSDDEE DDFETLRAIE  120
RRFSKYDSYA LKKNADNDLN KSESVCGTGI SLEQGTPSVL FAERNNAEVL GEELSNSGKT  180
CNVDQPSNFI EWHQSKATRS STLPLKYSGF PNPEAAEVFI NAIKKNRSCQ KFIRSKLIQI  240
EARIEENKRL KERVKVLKDF QVACRKRAGR ALSQRKDARV QLISVRKSKN SPTMKVNHKK  300
APALSFGPVE NSHVANYRIV LKRFPLSLSR QRWSETDKEN LWKGIKQQFQ EMLLQKSVEV  360
CGYVLYGDVT FENNVPGAYF LPNTCFRDSA SGDSNILDDI IASITNFEIT PVNIRYFLPK  420
VDWERLASTY VVGRSGAECE QRWLNIEDPL INHNPWTKPE DKKLLFILQQ GGIYNWINIS  480
ITLGTNRTPF QCLARYQRSL NSNIMKRDWT KDDDTQLRAA VEAFGENDWQ LIAFNLEGRT  540
GTQCSNRWIK TLHPARKRVG RWTVEEDKRL KVAVMLFGPK TWQKIAQFVP GRTQVQCRER  600
WVNCLDPSLN LEEWTEEEDC KLKAAIAEYG HCWSKVAASV PPRTDSQCRR RWKVLLPHEV  660
PLVQAARKIQ KAALISNFVD REAERPALDP TDFLSLPGTN SISEPENGKN IGKEKKSRGK  720
PKSKKTKDVT SCDAAPKNIS SERSRTEGET CHERNSRIQH VEDVETCGEE GTVLKEKKRA  780
PNKRFKMNQC TKPAPCDQDI PFLPEDSNIL RITDVDNIEN SAEDGTVSRK RKRAPKSCLK  840
KNQCTNPTPG NQDIPPFPDD SSILRITSGD DNTENCGDDG TILVKKKRAP NRRVKRNQCT  900
NPVPGNQDIP LFPEDSTILR ITNGDDNIEN CDEDGTVMGK KKRAPNKRLR RNQCTHPDPG  960
NQEVPLLLED STILKKTEGD DNIENCGEDA TVSGKKKRAP KRRLKTNQGA NTFSGNQDTP  1020
LLPEDSTILR ITNGDEHIET CGEVYTGSRK RKMAPNKRLK GNQHTEQAAG NQDILLCPED  1080
STIRITDVND NIESFGEEGN ISSMKNNNKK KRPKSHSKRN TSTDQPVQDQ EDLSLPPDDS  1140
ASLQVTNCEN IQTIGGVDAH SRDQDVQDQQ DLSLPPDNST SLQVTNSDDI QTIGGVGARS  1200
SDQGPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	885	895	KKKRAPNRRVK
2	995	1005	KKKRAPNRRVK
3	996	1004	KKRAPKRRL
4	997	1005	KKRAPKRRL
5	998	1003	RAPKRR
6	1000	1006	PKRRLKT
7	1048	1053	SRKRKM
8	1050	1060	KRKMAPNKRLK
9	1109	1119	KKKRPKSHSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein