PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G37110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family AP2
Protein Properties Length: 646aa    MW: 67233.5 Da    PI: 7.2685
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G37110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2392e-12304360155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GV++++++gr++A+++d  ++  g  rk  + g ++ +e+Aa+a++ a++k++g
  ONIVA03G37110.1 304 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 360
                      78*******************77776664346655.77******************98 PP

2AP247.93.3e-15403454155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s y+GV+++++ grW A+I  +s    +k  +lg+f t eeAa+a++ a+ k++g
  ONIVA03G37110.1 403 SIYRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 454
                      57****************999754...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 646 aa     Download sequence    
MASGNSSSSS GSMAATAGGV GGWLGFSLSP HMATYCAGGV DDVGHHHHHH VHQHQQQHGG  60
GLFYNPAAVA SSFYYGGGHD AVVTSAAGGG SYYGAGFSSM PLKSDGSLCI MEALRGGDQE  120
QQGVVVSASP KLEDFLGAGP AMALSLDNSA FYYGGHGHHQ GHAQDGGAVG GDPHHGGGGF  180
LQCAVIPGAG AGHDAALVHD QSAAAVAAGW AAMHGGGYDI ANAAADDVCA AGPIIPTGGH  240
LHPLTLSMSS AGSQSSCVTV QAAAAGEPYM AMDAVSKKRG GADRAGQKQP VHRKSIDTFG  300
QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE GQTRKGRQGG YDMEEKAARA YDLAALKYWG  360
PSTHINFPLE DYQEELEEMK NMSRQEYVAH LRRKSSGFSR GASIYRGVTR HHQHGRWQAR  420
IGRVSGNKDL YLGTFSTQEE AAEAYDVAAI KFRGLNAVTN FDITRYDVDK ILESSTLLPG  480
ELARRKGKVG DGGGAAAVAD AAAALVQAGN VAEWKMAAAL PAAARTEQQQ QHGHGGHQHH  540
DLLPSDAFSV LQDIVSTVDA AGAPPRAPHM SMAATSLGNS REQSPDRGVG GGVLATLFAK  600
PAAASKLYSP VPLNTWASPS PAVSSVPARA GVSIAHLPMF AAWTDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-130AP2 family protein