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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G37110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | AP2 | ||||||||
Protein Properties | Length: 646aa MW: 67233.5 Da PI: 7.2685 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39 | 2e-12 | 304 | 360 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g ONIVA03G37110.1 304 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 360 78*******************77776664346655.77******************98 PP | |||||||
2 | AP2 | 47.9 | 3.3e-15 | 403 | 454 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I +s +k +lg+f t eeAa+a++ a+ k++g ONIVA03G37110.1 403 SIYRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 454 57****************999754...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 646 aa Download sequence |
MASGNSSSSS GSMAATAGGV GGWLGFSLSP HMATYCAGGV DDVGHHHHHH VHQHQQQHGG 60 GLFYNPAAVA SSFYYGGGHD AVVTSAAGGG SYYGAGFSSM PLKSDGSLCI MEALRGGDQE 120 QQGVVVSASP KLEDFLGAGP AMALSLDNSA FYYGGHGHHQ GHAQDGGAVG GDPHHGGGGF 180 LQCAVIPGAG AGHDAALVHD QSAAAVAAGW AAMHGGGYDI ANAAADDVCA AGPIIPTGGH 240 LHPLTLSMSS AGSQSSCVTV QAAAAGEPYM AMDAVSKKRG GADRAGQKQP VHRKSIDTFG 300 QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE GQTRKGRQGG YDMEEKAARA YDLAALKYWG 360 PSTHINFPLE DYQEELEEMK NMSRQEYVAH LRRKSSGFSR GASIYRGVTR HHQHGRWQAR 420 IGRVSGNKDL YLGTFSTQEE AAEAYDVAAI KFRGLNAVTN FDITRYDVDK ILESSTLLPG 480 ELARRKGKVG DGGGAAAVAD AAAALVQAGN VAEWKMAAAL PAAARTEQQQ QHGHGGHQHH 540 DLLPSDAFSV LQDIVSTVDA AGAPPRAPHM SMAATSLGNS REQSPDRGVG GGVLATLFAK 600 PAAASKLYSP VPLNTWASPS PAVSSVPARA GVSIAHLPMF AAWTDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-130 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G37110.1 |