PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01497

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 460aa MW: 53606.1 Da PI: 7.1108

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01497	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.5	2.7e-26	106	188	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+l Lie+r++m++++r+++ k+plW ++s+ m +e g+ers k+Ckek+enl k+ykk+ + + + +++++f++l+ OIW01497 106 RWPRQETLSLIEIRSRMNSKFRETSHKGPLWNDISRIMmEEYGYERSGKKCKEKFENLYKYYKKTSKEGRH----DGKRYRFFNHLQ 188 8*********************************995677******************9987775....456799*997 PP
2	trihelix	37.7	5.5e-12	396	454	1	58
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenln 58 +Wt+ e+ Li++r e+r+++ g l+ ++W+++++km g+++s+++C + w++++ OIW01497 396 KWTEMEISNLIQLRFGFEHRFQEnGYLENGQWDDIAEKMVCLGYNKSATECMQIWDEIS 454 7*******************8568*************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MEDLRQLISP STHVCCKPNF PEPLLSTHHC TKAVTASQSN SYDPTMVSHS FYSPGLTQFS 60 HDYSSSTMIP TTNTTIAAIT GSDHDATACF SLKETGWLGF DAGNKRWPRQ ETLSLIEIRS 120 RMNSKFRETS HKGPLWNDIS RIMMEEYGYE RSGKKCKEKF ENLYKYYKKT SKEGRHDGKR 180 YRFFNHLQAI YGEIQTNTHA RNIHIVHETP SSINNQTSDV FSNHKGSDQR LSLSKSSSEF 240 ETSSSENNEE SISEIALIME KEHKRQSNGR VRRKSLRVIV EEVVESCMRK IIEAQDSWME 300 KVLSVVEQRE KEMMYKEDER KKKETMVFDK KVHELRAKER AWVEARDAAL MEVVKKHSGR 360 EFEAELFIEE AQDYKNKREG NDSKEYPCQG SDYRRKWTEM EISNLIQLRF GFEHRFQENG 420 YLENGQWDDI AEKMVCLGYN KSATECMQIW DEISISLSKA

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MEDLRQLISP STHVCCKPNF PEPLLSTHHC TKAVTASQSN SYDPTMVSHS FYSPGLTQFS  60
HDYSSSTMIP TTNTTIAAIT GSDHDATACF SLKETGWLGF DAGNKRWPRQ ETLSLIEIRS  120
RMNSKFRETS HKGPLWNDIS RIMMEEYGYE RSGKKCKEKF ENLYKYYKKT SKEGRHDGKR  180
YRFFNHLQAI YGEIQTNTHA RNIHIVHETP SSINNQTSDV FSNHKGSDQR LSLSKSSSEF  240
ETSSSENNEE SISEIALIME KEHKRQSNGR VRRKSLRVIV EEVVESCMRK IIEAQDSWME  300
KVLSVVEQRE KEMMYKEDER KKKETMVFDK KVHELRAKER AWVEARDAAL MEVVKKHSGR  360
EFEAELFIEE AQDYKNKREG NDSKEYPCQG SDYRRKWTEM EISNLIQLRF GFEHRFQENG  420
YLENGQWDDI AEKMVCLGYN KSATECMQIW DEISISLSKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	9e-65	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW01497