PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90812

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 596aa MW: 68416 Da PI: 5.8148

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90812	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.7	7.3e-19	101	180	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++evlaL+++r++me+++ + We+vs+k++e g++rs+++Ckek+e+ ++++ +i+ +++++++++ ++++++++le OIV90812 101 WTNDEVLALLRIRSSMESWFPEL-----TWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNINYTKNNNNNNNNNNYRFLSELE 180 ******************987.....9*************************************99999*****998 PP
2	trihelix	94.9	7.7e-30	437	524	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+evlaLi++r + ++ ++++ k+plWe++s+ m e g+ers+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql OIV90812 437 RWPKDEVLALINLRCNSLNNNNNEEmegNKAPLWERISQGMLELGYERSSKRCKEKWENINKYFRKTKDVNKKR-SLDSRTCPYFHQLS 524 8***********9888887765434499***************************************8.9999******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MFDGVPDQFH QFITQRTSLP LHLPFPLHSS AVPSNSSFPS FDPYNPSSHQ LPLQLQPNLL 60 HQLQHQHQAS IHKEHGAEKE EHGTVPMNFE VDQRDQNIDL WTNDEVLALL RIRSSMESWF 120 PELTWEHVSR KLAELGYKRS AEKCKEKFEE ESRYFNNINY TKNNNNNNNN NNYRFLSELE 180 ELYNQGDNHR VAGSEKPISI EGQDKIMDLE EDSTKQKVQD DDDEEDVVVE KPKEDMRAKR 240 KRPDRFEMFK GFCESIVHKM MEQQEEMHNK LIKDMMKRDE EKFAKEDAWK KHEMDRMNQE 300 LEIMAQEQAI ASDRQANMIE FLNKFSATTS SPISSQIKVT NVSNPNTCTT TPSSPPSQNP 360 NPSIMVLNNH VNNVSSEVEN PSSIPSQETL QNASSTTSPP IIQNPSSSSL NRQNNTNPVS 420 NKASSLVIVE KDGVGRRWPK DEVLALINLR CNSLNNNNNE EMEGNKAPLW ERISQGMLEL 480 GYERSSKRCK EKWENINKYF RKTKDVNKKR SLDSRTCPYF HQLSNLYNQG KLVLQSEKLE 540 NQLSPQANTV GVSTPDQNQS KLAESSSQVG SGGFSVDHHV GEKTLVHVPS LDFDQF

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MFDGVPDQFH QFITQRTSLP LHLPFPLHSS AVPSNSSFPS FDPYNPSSHQ LPLQLQPNLL  60
HQLQHQHQAS IHKEHGAEKE EHGTVPMNFE VDQRDQNIDL WTNDEVLALL RIRSSMESWF  120
PELTWEHVSR KLAELGYKRS AEKCKEKFEE ESRYFNNINY TKNNNNNNNN NNYRFLSELE  180
ELYNQGDNHR VAGSEKPISI EGQDKIMDLE EDSTKQKVQD DDDEEDVVVE KPKEDMRAKR  240
KRPDRFEMFK GFCESIVHKM MEQQEEMHNK LIKDMMKRDE EKFAKEDAWK KHEMDRMNQE  300
LEIMAQEQAI ASDRQANMIE FLNKFSATTS SPISSQIKVT NVSNPNTCTT TPSSPPSQNP  360
NPSIMVLNNH VNNVSSEVEN PSSIPSQETL QNASSTTSPP IIQNPSSSSL NRQNNTNPVS  420
NKASSLVIVE KDGVGRRWPK DEVLALINLR CNSLNNNNNE EMEGNKAPLW ERISQGMLEL  480
GYERSSKRCK EKWENINKYF RKTKDVNKKR SLDSRTCPYF HQLSNLYNQG KLVLQSEKLE  540
NQLSPQANTV GVSTPDQNQS KLAESSSQVG SGGFSVDHHV GEKTLVHVPS LDFDQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	1e-34	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV90812