![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM02G36330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 563aa MW: 58757.5 Da PI: 6.265 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 2e-15 | 212 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl OGLUM02G36330.1 212 KGPWSPEEDAKLKAYIEENGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 260 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.1 | 3.6e-12 | 267 | 309 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eE+ ++ + G++ W+ Ia+ ++ gRt++++k++w++ OGLUM02G36330.1 267 GDFTEEEEHIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 309 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 563 aa Download sequence |
MAAAAARDDD LGNDNLDDDR SNPRRQSGGR TAGPIRQGLH GGIGLQMTAA MAGDDANDGG 60 HSWRRWLSTA AVAAVLLSSG DGGDDDKATE GIRGSSAGMY TDKRSVSEDT HLYPSTKPTI 120 KPARPQPQMH PLTAAAKHAI TIPPPPPPAA AASYTSSPSS GTSDPSVLDL SSAEIDDDGD 180 GDDDRAEQQE IKNSKELVMG RAPCCDKASV KKGPWSPEED AKLKAYIEEN GTGGNWIALP 240 QKIGLKRCGK SCRLRWLNYL RPNIKHGDFT EEEEHIICSL YISIGSRWSI IAAQLPGRTD 300 NDIKNYWNTK LKKKLLGKRA PSRRARANQD HCGLVGGAAA AMCGGVGTAA AAAAPHQALS 360 SSALERIQLH MRLQGLYNSA FGCTTTTSNG GGVGVAPPQW PKLEALLPSR PLPAVQPTDA 420 VVATVQHPHH LVVGGHTLAT AAATTSEAFQ AAEHLDPAAA TGSNYMPGVA GVEMTSSSSM 480 AGGGGFVAGY GLHDELYDFL FKCESIGGAQ GGIIPSSLPE LQCPDGSAII GADEKFSTWT 540 SSSCDYGSGG AGDYVLGTHY LAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 1e-78 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM02G36330.1 |