PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1198s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 326aa    MW: 35599.8 Da    PI: 8.0225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1198s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.65.2e-33172229259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  Kaladp1198s0002.1.p 172 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCFVKKRVERSFQDPSTVITTYEGQHNHH 229
                          8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MSQPNRNPYD PYPYDPFFSS LEANPNASFF SSPQEDPNSY NSNLTGHCNS YITSFNDFVH  60
GGGSVVSSSS MSTVDYVYSN NNGVAVAVAG DHSCNGSNKL PMRHSLSVSS SSAEVVGEEY  120
SGKSMVDDID HHNGDDDQSK KVRNDKQKKK GAKRAKEPRF AFVTKSEIDQ LEDGYRWRKY  180
GQKAVKNSPY PRSYYRCTTQ KCFVKKRVER SFQDPSTVIT TYEGQHNHHS PATLRGNAAA  240
MLSANAALFG GSSSSLSPGS LSSIPHHPLF TTFNNGQNAA PPLYNYSSYQ NPSSKTSSSH  300
SIVPDFGSLQ DLVDHPSSGK RESDP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.11e-45WRKY family protein