PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0311.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 478aa MW: 51688.6 Da PI: 8.4283

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0311.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.2	3.6e-17	167	216	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Kaladp0101s0311.2.p 167 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*****************......55**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MWDLNAEMLT DDAPQAQRNV NHQTAERRAR AGPMMDDAGT STSSIIVNAA AAGDEDSNSS 60 NAARTFTFDI IMNSNTSPHH HQQDNIIASS SSSAAANARV FYSAAPNFGD GGVGSRSSSS 120 ATSPKSDWLN LSFADSAEQS EMRLLQQQQQ QQMPVKKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGSDAD INFNIADYQE DINQMKSLSK 240 EEFVHILRRQ STGFARGSSK YRGVTLHKCG RWEARMGQLL GKKAYDVAAL RCNGSEAATN 300 FEPSTYEGDV ASHPNNDASG HELDLSLTID SSSDYNPKLN ESSSHDGNFK GGGPKLVYPT 360 YATGGGQVPS AHSQPSMPAS YPTMSHGLAV HSGGYLPMSY EVMERSVAAV ASPRMPNWGW 420 QHSQGHGGTI SRLPPFSSAA SSGFSLSSSV TPATSLASLQ LQQPHQSSGY QNNYRKS*

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MWDLNAEMLT DDAPQAQRNV NHQTAERRAR AGPMMDDAGT STSSIIVNAA AAGDEDSNSS  60
NAARTFTFDI IMNSNTSPHH HQQDNIIASS SSSAAANARV FYSAAPNFGD GGVGSRSSSS  120
ATSPKSDWLN LSFADSAEQS EMRLLQQQQQ QQMPVKKSRR GPRSRSSQYR GVTFYRRTGR  180
WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGSDAD INFNIADYQE DINQMKSLSK  240
EEFVHILRRQ STGFARGSSK YRGVTLHKCG RWEARMGQLL GKKAYDVAAL RCNGSEAATN  300
FEPSTYEGDV ASHPNNDASG HELDLSLTID SSSDYNPKLN ESSSHDGNFK GGGPKLVYPT  360
YATGGGQVPS AHSQPSMPAS YPTMSHGLAV HSGGYLPMSY EVMERSVAAV ASPRMPNWGW  420
QHSQGHGGTI SRLPPFSSAA SSGFSLSSSV TPATSLASLQ LQQPHQSSGY QNNYRKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	2e-83	AP2 family protein