PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0311.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 493aa MW: 53430.6 Da PI: 7.8221

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0311.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	167	216	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Kaladp0101s0311.1.p 167 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*****************......55**********************998 PP
2	AP2	42.1	2.2e-13	259	309	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+t+ eAa+a++ a+++ +g Kaladp0101s0311.1.p 259 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDTEVEAARAYDVAALRCNG 309 89******.7**...5...334336******99********99766 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MWDLNAEMLT DDAPQAQRNV NHQTAERRAR AGPMMDDAGT STSSIIVNAA AAGDEDSNSS 60 NAARTFTFDI IMNSNTSPHH HQQDNIIASS SSSAAANARV FYSAAPNFGD GGVGSRSSSS 120 ATSPKSDWLN LSFADSAEQS EMRLLQQQQQ QQMPVKKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGSDAD INFNIADYQE DINQMKSLSK 240 EEFVHILRRQ STGFARGSSK YRGVTLHKCG RWEARMGQLL GKKYIYLGLF DTEVEAARAY 300 DVAALRCNGS EAATNFEPST YEGDVASHPN NDASGHELDL SLTIDSSSDY NPKLNESSSH 360 DGNFKGGGPK LVYPTYATGG GQVPSAHSQP SMPASYPTMS HGLAVHSGGY LPMSYEVMER 420 SVAAVASPRM PNWGWQHSQG HGGTISRLPP FSSAASSGFS LSSSVTPATS LASLQLQQPH 480 QSSGYQNNYR KS*

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MWDLNAEMLT DDAPQAQRNV NHQTAERRAR AGPMMDDAGT STSSIIVNAA AAGDEDSNSS  60
NAARTFTFDI IMNSNTSPHH HQQDNIIASS SSSAAANARV FYSAAPNFGD GGVGSRSSSS  120
ATSPKSDWLN LSFADSAEQS EMRLLQQQQQ QQMPVKKSRR GPRSRSSQYR GVTFYRRTGR  180
WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGSDAD INFNIADYQE DINQMKSLSK  240
EEFVHILRRQ STGFARGSSK YRGVTLHKCG RWEARMGQLL GKKYIYLGLF DTEVEAARAY  300
DVAALRCNGS EAATNFEPST YEGDVASHPN NDASGHELDL SLTIDSSSDY NPKLNESSSH  360
DGNFKGGGPK LVYPTYATGG GQVPSAHSQP SMPASYPTMS HGLAVHSGGY LPMSYEVMER  420
SVAAVASPRM PNWGWQHSQG HGGTISRLPP FSSAASSGFS LSSSVTPATS LASLQLQQPH  480
QSSGYQNNYR KS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	8e-92	AP2 family protein