PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0331.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 323aa    MW: 36125.7 Da    PI: 4.1861
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0331.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.6e-1574126156
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          s+++GV  ++ +grW+A+I  +     +k+ +lg++ t eeAa+a+++a+ +++g+
  Kaladp0008s0331.2.p  74 SKFRGVAKHHHNGRWEARIGRVLG---NKYLYLGTYSTQEEAAAAYDRAAIQYRGA 126
                          79****************988422...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MHFHSTVYLG AYDSEEAAAK TYDLAAIKYW GPETSLNFQI EMYRKEMEEM QKLSREEYLA  60
TLRRRSSGFS RGVSKFRGVA KHHHNGRWEA RIGRVLGNKY LYLGTYSTQE EAAAAYDRAA  120
IQYRGANAVT NFDVSNYADL LIKKDLAEEA GNEEQVVADE QPQPLNLKAE TDAQCQENKK  180
GIDVIDHLPK CEEAFDPYAS TTDQVSVEDH GMMNEHDFSW DLNLDPDFSE LPMPNLSDIA  240
ESCCELQCEL PALFDDYTGF EDNLDFMFTS GLEENMFDLG DGEKGNGAST SLPIMTSSSS  300
SSSISCLSTS PSNSYSYDDY LV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.32e-59AP2 family protein