PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70928.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

CPP

Protein Properties

Length: 931aa MW: 101854 Da PI: 8.4342

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51	2.8e-16	278	317	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e GBG70928.1 278 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCVDCKNYE 317 589***********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MEATRKGEVK TEVSEESIDS NIQQLREALA AEERKKEEVS RRREQEQRRG QRVQEIRQII 60 GTEVSEQADM SQTLAHIVTY LTFLEEKIDR HQNQLDEIAV GLRTIANIVK EIQTYVSTAP 120 VELESQVAFT TSCMGGEAKQ WVLAKANAAG FEDIAVVKSG GSQYNGKRVL WRQKRQDHTL 180 VVFDDDTVEK WPNEENDNNS DSGKGEVTAV VANKGGPPRT GGKKQRAFPW HPGIADGKPW 240 VEMGMTRKTW QERMDNAQCL KCGTAGHEDV CEQPLAGKHN KGCHCKKSGC LKKYCECFQA 300 NILCSENCKC VDCKNYEGSD DRRALFYNPG NGSSMGPAGT MPLLSNGSGL GLCMVGVGAN 360 GTTSGDHGIL PGTNHASIGN MGPSPYMSPS PPPMKRVRVV PDRAFLQGVK DQGILRRPIP 420 QVDMGRGIRI GNSMSPYPQV AVPLARHGGH QAQAFPAKPA TKSLLSGVVR PGSVMELCKL 480 LAQAARDVAK NFEAQHGLSE AKLAKRITDS NGMEATPNDN RLQNGTVSPS SSKPTTDGTE 540 TSPDRKGDGN DPDHASTGRD EDPAGALKAG PEGADQPTGR RVGNRPVKGR RPSGYPYISF 600 VMNFSQMWAM YCLVQFYMAT REFLAPIKPI GKFMCIKAVI FMTWWQGLFI AFFFSIGIVT 660 PQPELIPGKL QTGLQDLLIC IEMSIAAAAH LYVFPATPYQ NLRVGCTAEV RVLRDYAGGP 720 PDVDEVLESE KPAFVKWPMD SPMDISEGPP SFSESVSNML VGGSNTVVKD VRFTVSQAVE 780 PVERARQKLQ DGIGVINSWS THLKMRDCTF WQESKDDSWI GVGGERNVGI GPVRGIDDPM 840 LLGSQSDSGI LRASRRFRTG IFHGHGRLDR PAVGELNRPA VGGEIVEQRL EPRPPRKGRG 900 QGKGRREIEG DIVEIVFDRK PPLRGGRGAK R

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MEATRKGEVK TEVSEESIDS NIQQLREALA AEERKKEEVS RRREQEQRRG QRVQEIRQII  60
GTEVSEQADM SQTLAHIVTY LTFLEEKIDR HQNQLDEIAV GLRTIANIVK EIQTYVSTAP  120
VELESQVAFT TSCMGGEAKQ WVLAKANAAG FEDIAVVKSG GSQYNGKRVL WRQKRQDHTL  180
VVFDDDTVEK WPNEENDNNS DSGKGEVTAV VANKGGPPRT GGKKQRAFPW HPGIADGKPW  240
VEMGMTRKTW QERMDNAQCL KCGTAGHEDV CEQPLAGKHN KGCHCKKSGC LKKYCECFQA  300
NILCSENCKC VDCKNYEGSD DRRALFYNPG NGSSMGPAGT MPLLSNGSGL GLCMVGVGAN  360
GTTSGDHGIL PGTNHASIGN MGPSPYMSPS PPPMKRVRVV PDRAFLQGVK DQGILRRPIP  420
QVDMGRGIRI GNSMSPYPQV AVPLARHGGH QAQAFPAKPA TKSLLSGVVR PGSVMELCKL  480
LAQAARDVAK NFEAQHGLSE AKLAKRITDS NGMEATPNDN RLQNGTVSPS SSKPTTDGTE  540
TSPDRKGDGN DPDHASTGRD EDPAGALKAG PEGADQPTGR RVGNRPVKGR RPSGYPYISF  600
VMNFSQMWAM YCLVQFYMAT REFLAPIKPI GKFMCIKAVI FMTWWQGLFI AFFFSIGIVT  660
PQPELIPGKL QTGLQDLLIC IEMSIAAAAH LYVFPATPYQ NLRVGCTAEV RVLRDYAGGP  720
PDVDEVLESE KPAFVKWPMD SPMDISEGPP SFSESVSNML VGGSNTVVKD VRFTVSQAVE  780
PVERARQKLQ DGIGVINSWS THLKMRDCTF WQESKDDSWI GVGGERNVGI GPVRGIDDPM  840
LLGSQSDSGI LRASRRFRTG IFHGHGRLDR PAVGELNRPA VGGEIVEQRL EPRPPRKGRG  900
QGKGRREIEG DIVEIVFDRK PPLRGGRGAK R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-34	CPP family protein