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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY69427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 35334.2 Da PI: 6.3519 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.9e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + +++ g+ R++k+c++rw++yl GAY69427.1 14 KGPWSPEEDAKLKEYIEKNGTGgNWIALPHKAGLMRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 41.2 | 3.8e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ +++ G++ W+tIa+ ++ gRt++++k++w++ GAY69427.1 69 GEFSDDEDRIICSLFASIGSR-WSTIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KNGTGGNWIA LPHKAGLMRC GKSCRLRWLN 60 YLRPNINHGE FSDDEDRIIC SLFASIGSRW STIAAQLPGR TDNDIKNYWN TKLKKKLIGI 120 VNQQSQIKTH QAAVSSFSSL FQTSSSSSSS SSPSPSPTIS YNCNDINAYY TTTARSFTGL 180 ERNSSFSNSL LLSSNSCITA QHQVKEKIFM FGGDQASFSS SDGSCSNQQI SHGKEFDYEY 240 YGGRNNKCEQ MGLQNNLFYN GVEGDNKFMI SNVETPLDYG LEEIKQLISS SSSSCNNFLF 300 DENKTEESLV LLNDADCE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 2e-75 | MYB family protein |