PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY66903.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 336aa MW: 38121.4 Da PI: 7.2068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY66903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl GAY66903.1 14 KGPWSPEEDSKLKEYIEKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	41.2	3.7e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd l+ +++ G++ W+ Ia+ ++ gRt++++k++w++ GAY66903.1 69 GEFTDEEDRLICSLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FTDEEDRLIC SLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMAM 120 APPLSSQKKS TAPPLIPSSH HHHQALVSLL PSQPYYTPSN KSLISNSFDS FEPISSNTPL 180 HLFDNNNLIQ IQENQLFSNN NSMQGYYPMK DNFLTFGSEQ SCSSSDGSCS QIKQEDIGFH 240 QGFNYSNGFE ENNQKFMLNY GSSDRGGHES LNQWSEKPNG YFGEIASDYS LEDVKQLISC 300 SNINGCNNEN NINFFSSTDQ ETKLQDSKVM YHYFNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-78	MYB family protein