PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63609.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 134aa    MW: 15815.3 Da    PI: 10.175
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.12e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEdellv  v+++G ++W+ Ia+  g++R++k+c++rw++yl
       GAY63609.1 14 KGPWHEEEDELLVTFVTLFGERRWDYIAKASGLKRSGKSCRLRWLNYL 61
                     79*********************************************7 PP
2Myb_DNA-binding44.82.8e-1473109846
                      HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      E+e++++++k++G++ W +Iar ++ gRt++++k++w++
       GAY63609.1  73 EEEQIIQLHKKWGNK-WLRIARSLP-GRTDNEIKNYWRT 109
                      9**************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MVYQAAMQEE KSSKGPWHEE EDELLVTFVT LFGERRWDYI AKASGLKRSG KSCRLRWLNY  60
LCPNIKHGYI STEEEQIIQL HKKWGNKWLR IARSLPGRTD NEIKNYWRTR IRKKIQAQEQ  120
GALLFASGFL MIAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.18e-53MYB family protein