PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60707.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 358aa    MW: 40133 Da    PI: 6.774
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l+ +++++G+g+W+  ++  g+ R++k+c++rw +yl
       GAY60707.1 14 KGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP

2Myb_DNA-binding54.52.7e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
       GAY60707.1  67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MGRAPCCDKN GLKKGPWTPE EDHKLISYIQ LHGPGNWRNL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRNG  120
IDPVTHAPRL DLLDLSAILR STLCGSSASL LNMSSLLGGS THQALLNPEL LRLASTLLSL  180
KQDNPEMLLQ YLQQNQQLCN SQMQNQIPAM SNLNQFHQAP LSDQSPTCTT SAAACTSLPD  240
QSQLTQADLD GLLSNLTNFN SQNLSQENLI PPSFDENFAS QPLPNQMYNR SSNGNQHFRF  300
DSVMSSTPLS SPTPLNSSST FINSSTEDER ESYCSSLLKF EIPESLDIND FISEHSFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-92MYB family protein