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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 375aa MW: 41411.7 Da PI: 6.2705 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.4e-18 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell++++++ G g+W+t +++ g+ R++k+c++rw +yl GAY57528.1 34 RGPWTPEEDELLANYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 81 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 8.8e-15 | 92 | 132 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l GAY57528.1 92 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 132 89***************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MRNPSTSPSS TAAAAAAAAT NKSTPCCSKV GLKRGPWTPE EDELLANYIN KEGEGRWRTL 60 PKRAGLLRCG KSCRLRWMNY LRPSVKRGHI APDEEDLILR LHRLLGNRWS LIAGRIPGRT 120 DNEIKNYWNT HLSKKLISQG IDPRTHKPLN QELDPSSADQ VTNSNSKAST SKAILNSSSS 180 NPNLTPMTVS SGHLDQRHTS AGCGRMISSI MMINKENGYS PNALVDDHDS EYHQNGMMEN 240 PYTSLSNCDH HHDDDGGLGL RSNNVNNVFN EGLSYEVDVD INYCNDDVFS SFLNSLINED 300 AFASQHNQQV LQQQQQQHLS NETIALPNTI TGSSSDPLVS TAAASTFGLE ANWESPIMAS 360 SLNQDESRRV DEHVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 4e-83 | MYB family protein |