PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57528.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 375aa    MW: 41411.7 Da    PI: 6.2705
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.4e-183481148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEdell++++++ G g+W+t +++ g+ R++k+c++rw +yl
       GAY57528.1 34 RGPWTPEEDELLANYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 81
                     89******************************99************97 PP

2Myb_DNA-binding46.48.8e-1592132648
                      HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
       GAY57528.1  92 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 132
                      89***************.*********.************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MRNPSTSPSS TAAAAAAAAT NKSTPCCSKV GLKRGPWTPE EDELLANYIN KEGEGRWRTL  60
PKRAGLLRCG KSCRLRWMNY LRPSVKRGHI APDEEDLILR LHRLLGNRWS LIAGRIPGRT  120
DNEIKNYWNT HLSKKLISQG IDPRTHKPLN QELDPSSADQ VTNSNSKAST SKAILNSSSS  180
NPNLTPMTVS SGHLDQRHTS AGCGRMISSI MMINKENGYS PNALVDDHDS EYHQNGMMEN  240
PYTSLSNCDH HHDDDGGLGL RSNNVNNVFN EGLSYEVDVD INYCNDDVFS SFLNSLINED  300
AFASQHNQQV LQQQQQQHLS NETIALPNTI TGSSSDPLVS TAAASTFGLE ANWESPIMAS  360
SLNQDESRRV DEHVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.14e-83MYB family protein