PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52792.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 892aa MW: 99878.1 Da PI: 6.574

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.2	1.3e-31	585	642	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK++kg+e+prsYY+Ct+ +Cpvkkkvers+ + ++++i+Y++eHnhek GAY52792.1 585 DDGYNWRKYGQKPIKGNEYPRSYYKCTHVNCPVKKKVERSS-NAQITQIIYKNEHNHEK 642 8**************************************.*************85 PP
2	WRKY	104.8	4.7e-33	782	840	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+ +dpk+v++tYeg+Hnh+ GAY52792.1 782 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNPGCNVRKHVERAPTDPKAVVTTYEGKHNHD 840 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MASWVFNCHT LSFFLPSNPI TKQQPPNHNR TSTFPPNRSN PSLLPRTTLV RVKNSSSATA 60 AEQMEEEESM MSIDNLNRFF YLNKGNWSGS FHQFDGHGNL MQKVSTKLAV STYGEDELIS 120 LIQTLYIKQP PSSTSISGYE EEEPEWAEYK IKETNMFTVD KYQQIGFFPD ERAFSLRYQT 180 AGMLETVLRQ GVLGEDDTGE ESPKNLKLPS RQPAIVCENC LYSQEKDRRV RAFHIMDPKG 240 ILEMLLIFLE DRDGGVLFPP FLENVGDINS TSNTSDGQEV TTNVHWTGTM SGNLVTFEDA 300 YQFTFLPGGM YMGCPCDIAK SVAEFKSFHL EFGWVETPCK RQRLVRTYDV EGLAVSSTYF 360 SEIKFGKEHL TQKKRPTIIL PPRPSMESLY GSGLSPGPMT LVSSFFAEDL NNQSFSQLLA 420 GAMASPLASK QAQSFLVDYS TDGDGDGDDK SYGFKENRPT SLMIARSPLF TVPPGLSPSG 480 LLNSPGFFSP QSPFGMSHQQ ALATVTAQAF LAQSSMHKQA EYQPSLLSAP EESLTCNLSV 540 TPDEPSQQQM PHSNSAPQSS MTEPLEVSHS DGKHMHPSAV DKPADDGYNW RKYGQKPIKG 600 NEYPRSYYKC THVNCPVKKK VERSSNAQIT QIIYKNEHNH EKPQLSKRAK DSSDANENNN 660 SQANPEPVLH GQTLYGSSVL GSNQESAQAA PIHLADSSDS EELGDAENRK EGDDDEPNTK 720 RRQVSKKYCI YSCRCCPLFF QILSLFVFKT RNIAVESEIV LSQKTVTEPK IIVQTRSEVD 780 LLDDGYRWRK YGQKVVKGNP HPRSYYKCTN PGCNVRKHVE RAPTDPKAVV TTYEGKHNHD 840 VPAAKNGSHS APPRLKPNKV VTEKHPLLKD MDFGHDDQRP VLLRLKEEQI IV

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MASWVFNCHT LSFFLPSNPI TKQQPPNHNR TSTFPPNRSN PSLLPRTTLV RVKNSSSATA  60
AEQMEEEESM MSIDNLNRFF YLNKGNWSGS FHQFDGHGNL MQKVSTKLAV STYGEDELIS  120
LIQTLYIKQP PSSTSISGYE EEEPEWAEYK IKETNMFTVD KYQQIGFFPD ERAFSLRYQT  180
AGMLETVLRQ GVLGEDDTGE ESPKNLKLPS RQPAIVCENC LYSQEKDRRV RAFHIMDPKG  240
ILEMLLIFLE DRDGGVLFPP FLENVGDINS TSNTSDGQEV TTNVHWTGTM SGNLVTFEDA  300
YQFTFLPGGM YMGCPCDIAK SVAEFKSFHL EFGWVETPCK RQRLVRTYDV EGLAVSSTYF  360
SEIKFGKEHL TQKKRPTIIL PPRPSMESLY GSGLSPGPMT LVSSFFAEDL NNQSFSQLLA  420
GAMASPLASK QAQSFLVDYS TDGDGDGDDK SYGFKENRPT SLMIARSPLF TVPPGLSPSG  480
LLNSPGFFSP QSPFGMSHQQ ALATVTAQAF LAQSSMHKQA EYQPSLLSAP EESLTCNLSV  540
TPDEPSQQQM PHSNSAPQSS MTEPLEVSHS DGKHMHPSAV DKPADDGYNW RKYGQKPIKG  600
NEYPRSYYKC THVNCPVKKK VERSSNAQIT QIIYKNEHNH EKPQLSKRAK DSSDANENNN  660
SQANPEPVLH GQTLYGSSVL GSNQESAQAA PIHLADSSDS EELGDAENRK EGDDDEPNTK  720
RRQVSKKYCI YSCRCCPLFF QILSLFVFKT RNIAVESEIV LSQKTVTEPK IIVQTRSEVD  780
LLDDGYRWRK YGQKVVKGNP HPRSYYKCTN PGCNVRKHVE RAPTDPKAVV TTYEGKHNHD  840
VPAAKNGSHS APPRLKPNKV VTEKHPLLKD MDFGHDDQRP VLLRLKEEQI IV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-133	WRKY family protein