PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52727.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 404aa    MW: 44997 Da    PI: 7.2996
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.6e-16119164147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+++G+ +W++Ia+++  gR++k+c++rw++ 
       GAY52727.1 119 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 164
                      899*****************************.***********996 PP

2Myb_DNA-binding51.32.7e-16172214246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +++++E+e+l  a++ +G++ W+ Iar ++ gRt++ +k++w+ 
       GAY52727.1 172 RAFSEDEEERLMAAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 214
                      689******************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MTLQQFHNST SCHKRKMNSM TNHYKNTINA NAPTINSSMD MFAAVAHMGS LCASPRNNSG  60
HIVTSQNICY CDSSDHQKSD LAAGGDSDNN NKVDESVDGY EDMEDVKKMD GGLSKVCSRG  120
HWRPAEDSKL KELVALYGPQ NWNLIAEKLE GRSGKSCRLR WFNQLDPRIN KRAFSEDEEE  180
RLMAAHRVYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY REQSSAYYRR RKFLNQVVDD  240
KKLEAAVAAN DLEPNINNVH DISSSSYKSD DSFSQKSMQQ WGMIMKDGAS FTVSSPYTHH  300
HHQQQFLMPM QHSSNYHLSA AAGFSDTMAS AASQVTITEP SASSSSSQSA AENKRGTSHL  360
EATISPPFID FLGEPENATL SFGRGTITSK DEMTVSLGSS ELAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.13e-75MYB family protein