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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY52727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 404aa MW: 44997 Da PI: 7.2996 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 119 | 164 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ GAY52727.1 119 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 164 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.7e-16 | 172 | 214 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++++E+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ GAY52727.1 172 RAFSEDEEERLMAAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 214 689******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence |
MTLQQFHNST SCHKRKMNSM TNHYKNTINA NAPTINSSMD MFAAVAHMGS LCASPRNNSG 60 HIVTSQNICY CDSSDHQKSD LAAGGDSDNN NKVDESVDGY EDMEDVKKMD GGLSKVCSRG 120 HWRPAEDSKL KELVALYGPQ NWNLIAEKLE GRSGKSCRLR WFNQLDPRIN KRAFSEDEEE 180 RLMAAHRVYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY REQSSAYYRR RKFLNQVVDD 240 KKLEAAVAAN DLEPNINNVH DISSSSYKSD DSFSQKSMQQ WGMIMKDGAS FTVSSPYTHH 300 HHQQQFLMPM QHSSNYHLSA AAGFSDTMAS AASQVTITEP SASSSSSQSA AENKRGTSHL 360 EATISPPFID FLGEPENATL SFGRGTITSK DEMTVSLGSS ELAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 3e-75 | MYB family protein |