PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY50850.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

EIL

Protein Properties

Length: 394aa MW: 45034.2 Da PI: 4.7355

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY50850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	22.7	1.6e-07	149	199	301	353
XXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 301 tagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 ++f++vrkrk ++ s+k+ ++ ++tc+ q+++s+++l+ d++s+++++ GAY50850.1 149 VSNFDFVRKRKPSNDLSMKMDQH--IYTCEYLQCPYSDPRLGYCDRTSRDNHQ 199 4599****9555555555444..7***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MYSHFTVKPP RPRRLRYLGN FEVLIQLLLI DSQEKERETC KFGVSVGVNA VGMMMSFDEM 60 GFCGDMNFFS APLGDADMAV QPSEPEATVE DDYTDEEMDV DELERRMWKD KMRLKRLKEQ 120 SRGKEGIDMA KQQRLPNQQP PYAIKGEVVS NFDFVRKRKP SNDLSMKMDQ HIYTCEYLQC 180 PYSDPRLGYC DRTSRDNHQL TCPYKSGASE FAGSDFHVNE VKPVIFPQTF AQSKPAGPTF 240 NSVQPSFDIS GLGVPEDGQK MISELMSIYD NNIQGNRNVN PSNNAVVTEG QNTLQPRAQH 300 QQEYYHGQGA VMDGNLFEGS NMHDNNHLMF PREENQFDRF KIMNSPFENN SSGSNNNFSL 360 MFESPFDLGS FDYKEDFQAA GVDTMPKHDS SVWF

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MYSHFTVKPP RPRRLRYLGN FEVLIQLLLI DSQEKERETC KFGVSVGVNA VGMMMSFDEM  60
GFCGDMNFFS APLGDADMAV QPSEPEATVE DDYTDEEMDV DELERRMWKD KMRLKRLKEQ  120
SRGKEGIDMA KQQRLPNQQP PYAIKGEVVS NFDFVRKRKP SNDLSMKMDQ HIYTCEYLQC  180
PYSDPRLGYC DRTSRDNHQL TCPYKSGASE FAGSDFHVNE VKPVIFPQTF AQSKPAGPTF  240
NSVQPSFDIS GLGVPEDGQK MISELMSIYD NNIQGNRNVN PSNNAVVTEG QNTLQPRAQH  300
QQEYYHGQGA VMDGNLFEGS NMHDNNHLMF PREENQFDRF KIMNSPFENN SSGSNNNFSL  360
MFESPFDLGS FDYKEDFQAA GVDTMPKHDS SVWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20770.1	1e-40	EIL family protein