PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 338aa    MW: 38009.8 Da    PI: 6.5629
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.12e-181360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++ v+ +G g+W+++++  g+ R++k+c++rw +yl
       GAY49011.1 13 RGLWSPEEDEKLIKHVTTHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60
                     788*******************************************97 PP

2Myb_DNA-binding52.41.2e-1666109146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T++E+ +++d ++ lG++ W+ Ia++++ gRt++++k++w++
       GAY49011.1  66 RGSFTEQEERIIIDIHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                      89********************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGHNCCSKQK VKRGLWSPEE DEKLIKHVTT HGHGSWSSVP KLAGLQRCGK SCRLRWINYL  60
RPDLKRGSFT EQEERIIIDI HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIARGI  120
DPNTHNLISP TSCAQIYTNS TYSNACNKLP HQVQLSNSPV FLADSHMKEI IKSPHLTSPF  180
NNVSSLDLIN TTQYSISPSI LHEISSLLPA SEYQNPNQFW TLPEQNPHAS SMESANPCGF  240
GLIDENNGLL GGSFFEITET DAGKETMLQP LMIDAQQEKV CEVGNGKITN ELNDNGQNMN  300
ASFERADFDF DDHLVESTAL SCGMYCNFSP IMNQFAWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.18e-83MYB family protein