PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48263.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 1046aa    MW: 114347 Da    PI: 4.9577
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.4e-193783148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEde+l +av+++ g++Wk+Ia+++   Rt+ qc +rwqk+l
       GAY48263.1 37 KGQWTPEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83
                     799****************************9.************986 PP

2Myb_DNA-binding65.87.8e-2189135148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l
       GAY48263.1  89 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135
                      79******************************.*************97 PP

3Myb_DNA-binding48.61.9e-15141183145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      + +WT+eE++ l++a++ +G++ W+   + ++ gRt++ +k++w+
       GAY48263.1 141 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 183
                      579*******************.*********.***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1046 aa     Download sequence    
MESDRVISAP SDGLGDGGQR MRSMHGRTSG PTRRSTKGQW TPEEDEILRK AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVNKYGPK KWSTIAQHLP  120
GRIGKQCRER WHNHLNPAIN KEAWTQEEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN  180
HWNSSVKKKL DSYLASGLLE QFQGLPLVGH QNQPLPSSSQ RMQSSGDESC PKGGTEGEEV  240
SECSQESAGV AHTHSAGNVV LQTRDQFIFS EESCPGKDRS SSPASCTEQY YTSLEDVTFS  300
IPEIPCEAGC SSKFPEQSFV NNAGSFARTP YQFNLQDVSN FSALELGHQS AGLPAHCISS  360
HEGHEVANVP FQSSMGLSVP SSAGNLAAGS AKPENMLISD DECCRVLFAE AMKDGCFSLE  420
NLPQGLNIVD SLLCRSLDVP ISESDRTSSS QAFCPLRPEL LGTSCSQSFL SGPMLLLPDD  480
SGFLYGREPS QLNCHSYGTQ EQELNTNGQA GFICTNESTN SPCDDGTDNS GLQESSYLPK  540
DSLKLVPINT FGSGADAMIS CPSVEVKQEA QTEQQDSGAL CYEPPRFPSL DIPFFSCDLI  600
QSGNDMLQEY SPLGIRQLMS SMNCITPFRL WDSPSRDGSP EAVLKSAAKT FTGTPSILKK  660
RNRDLLSPLS DRRNDKKLET DLTSCLARDF SRLDVMFDDG AANKASLLSP SSNQKRNSGS  720
FIEDKENLSG GQEKDKDIIV KDKTSEKDFD GSNSQENMKP KTVDTDSKTK IDADAASETV  780
KKPASILVEH NMNDLLFSPD QVGSKANRAL GSLARTPRTQ YCKGFGVTAN QGFSSEQSPR  840
NTSSPAVCKR SNESSAGAVA SVQAIPSLAL TGETTTTAGN DAGTENYNIF GETPFKRSIE  900
SPSAWKSPWF INSFVPGPRV DTEISIEDIG YFMSPGDRSY DALGLMKQLS EHTAAAYADA  960
LEVLGGESSE TLVNERNSKS PSMDQGIEHL PENENESSHL DSNVMMERRT LDFSECGTPA  1020
KGTETRKSLT GVNFSSPSSY LLKGCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.20.0MYB family protein