PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY46386.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 334aa    MW: 36947.2 Da    PI: 8.0319
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY46386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +l+  v+ +G+g+W++++++ g++R++k+c++rw +yl
       GAY46386.1 14 RGLWTPEEDAKLLAHVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNYL 61
                     788*******************************************97 PP

2Myb_DNA-binding42.41.6e-1371110546
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       + E+e++++++k  G++ W++Ia+ ++ gRt++++k++w++
       GAY46386.1  71 APHEEEIIINLHKAIGSR-WSLIAQQLP-GRTDNDVKNFWNT 110
                      589***************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGRPPCCDKS NVKRGLWTPE EDAKLLAHVA NHGTGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLRHASF APHEEEIIIN LHKAIGSRWS LIAQQLPGRT DNDVKNFWNT KLKKKLMKLG  120
IDPITHKPFS QIFSDYGNIS GLSINTGNHF GKCINNSLMS KPEPYLVLNG VQNTSYDNPL  180
WDYMAQFHAP VQPHFLTEVA SSCSSSSSGA VTQLNSPQSH AQITPSSPFN WSEFLACDTS  240
LSVDLQQQQQ LGPQRMLSSP NSTFTRNETF GCHFTSKNDH GSAGSNYTTS YANQVSKSAS  300
AASSSSSSFV DAILSKDSEM SSQSFELLDE SFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.15e-82MYB family protein