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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY46386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 334aa MW: 36947.2 Da PI: 8.0319 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l+ v+ +G+g+W++++++ g++R++k+c++rw +yl GAY46386.1 14 RGLWTPEEDAKLLAHVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 42.4 | 1.6e-13 | 71 | 110 | 5 | 46 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + E+e++++++k G++ W++Ia+ ++ gRt++++k++w++ GAY46386.1 71 APHEEEIIINLHKAIGSR-WSLIAQQLP-GRTDNDVKNFWNT 110 589***************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MGRPPCCDKS NVKRGLWTPE EDAKLLAHVA NHGTGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLRHASF APHEEEIIIN LHKAIGSRWS LIAQQLPGRT DNDVKNFWNT KLKKKLMKLG 120 IDPITHKPFS QIFSDYGNIS GLSINTGNHF GKCINNSLMS KPEPYLVLNG VQNTSYDNPL 180 WDYMAQFHAP VQPHFLTEVA SSCSSSSSGA VTQLNSPQSH AQITPSSPFN WSEFLACDTS 240 LSVDLQQQQQ LGPQRMLSSP NSTFTRNETF GCHFTSKNDH GSAGSNYTTS YANQVSKSAS 300 AASSSSSSFV DAILSKDSEM SSQSFELLDE SFDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 5e-82 | MYB family protein |