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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 289aa MW: 33048.3 Da PI: 6.3984 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.2 | 4.3e-19 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd ll ++v+ +G g+W+++a+ g++Rt+k+c++rw++yl GAY44892.1 26 KGPWTVEEDSLLMNYVAIHGEGRWNAVASSAGLNRTGKSCRLRWLNYL 73 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.8 | 6.9e-15 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++ +++++ ++G++ W++Ia++++ gRt++++k++w++ GAY44892.1 79 RGNITLQEQLMILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 122 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MDAHVGGFSS GNHRQQSEEA ILGVRKGPWT VEEDSLLMNY VAIHGEGRWN AVASSAGLNR 60 TGKSCRLRWL NYLRPDVRRG NITLQEQLMI LELHSRWGNR WSKIAQYLPG RTDNEIKNYW 120 RTRVQKHAKQ LKCDVNSKQF RDAMRFVWVP RLIERIQAQS DSNSSGQPTS STTTCTDNST 180 TTNHADLATS QVSDSRPDPS FRADISGAQV YPESDLNDSY NLHSDWNYSQ NGLDNACESW 240 GWSKPGSDTQ GFEQQIQNNN WLGCGDSLES LWNEENIWFL RQQLYDDKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 8e-81 | MYB family protein |