PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42152.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 312aa MW: 34480.8 Da PI: 7.1157

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+lv+++k+ G g+W++ ++ g+ R++k+c++rw +yl GAY42152.1 14 KGPWAPEEDEILVEYIKRNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.2	5.8e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l GAY42152.1 67 RGPFTEEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MGRTPCCDKK GLKKGPWAPE EDEILVEYIK RNGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TEEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRMLLMG 120 LDPQTHEPFS SSGPAIKAPA TPTTRHMAQW ESARLEAEAR LSRESLLFNT PSMGKTDSDH 180 FLRMWNSEVG ESFRKFNKGV KTACQSPNSQ VSSSTKCGSV SAVSTEIGHN LAGSSATPSN 240 QNEDTECKSS KSCTEDMVAG SDTSSSNDLQ DSSDSSLQLL LDFPINNDMS FLEDNYFASS 300 AMFTGDSLIC PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-124	MYB family protein