PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41184.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 303aa    MW: 33693.1 Da    PI: 8.0894
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.17.2e-171663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48
                     rg W++eEd +l++++k++G gtW+  ++  g + R++k+c++rw +yl
       GAY41184.1 16 RGVWSPEEDAKLIQYIKEHGHGTWRHLPKQAGiL-RSGKSCRLRWMNYL 63
                     899*****************************55.************97 PP

2Myb_DNA-binding391.9e-1269112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++ +eE   +++++ ++G++ W++Ia++++ gRt++++k+ w++
       GAY41184.1  69 RGPFAPEEVATIIQLHGLFGNK-WAAIASHLP-GRTDNDIKNLWNT 112
                      899*******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGKRKTPFCD MEKMKRGVWS PEEDAKLIQY IKEHGHGTWR HLPKQAGILR SGKSCRLRWM  60
NYLRPDIKRG PFAPEEVATI IQLHGLFGNK WAAIASHLPG RTDNDIKNLW NTRLKKHLQS  120
MNHNLLTYQS PSSSGPSTVK SDFPSTRQMV KCASARVEAE APLSIQSSSL LNSPLVDKPY  180
SDIYLGLWNS IVGGSFRKTA RKSGGLSENA ISQTSLQMKL EPGSIVEDQA KANRTSASSD  240
TAPEQDDSYK PKVDMMAVSD SIGSNEFTDS SDTALKLLLD FPDDDGMEFL DEQMGNISDF  300
PNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.13e-78MYB family protein