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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 33693.1 Da PI: 8.0894 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.2e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 rg W++eEd +l++++k++G gtW+ ++ g + R++k+c++rw +yl GAY41184.1 16 RGVWSPEEDAKLIQYIKEHGHGTWRHLPKQAGiL-RSGKSCRLRWMNYL 63 899*****************************55.************97 PP | |||||||
2 | Myb_DNA-binding | 39 | 1.9e-12 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++ +eE +++++ ++G++ W++Ia++++ gRt++++k+ w++ GAY41184.1 69 RGPFAPEEVATIIQLHGLFGNK-WAAIASHLP-GRTDNDIKNLWNT 112 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MGKRKTPFCD MEKMKRGVWS PEEDAKLIQY IKEHGHGTWR HLPKQAGILR SGKSCRLRWM 60 NYLRPDIKRG PFAPEEVATI IQLHGLFGNK WAAIASHLPG RTDNDIKNLW NTRLKKHLQS 120 MNHNLLTYQS PSSSGPSTVK SDFPSTRQMV KCASARVEAE APLSIQSSSL LNSPLVDKPY 180 SDIYLGLWNS IVGGSFRKTA RKSGGLSENA ISQTSLQMKL EPGSIVEDQA KANRTSASSD 240 TAPEQDDSYK PKVDMMAVSD SIGSNEFTDS SDTALKLLLD FPDDDGMEFL DEQMGNISDF 300 PNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 3e-78 | MYB family protein |