PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38542.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family LBD
Protein Properties Length: 274aa    MW: 31302 Da    PI: 4.7059
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.63.3e-41241231100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k+l++ e+++am+++++++++ra+dPv G++++i++lq+q+e  kael+l+ +
  GAY38542.1  24 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKHLEPPEKDEAMRTIIFQSDVRANDPVGGCYRIIKELQRQIEYNKAELELVLH 122
                 7*********************************************************************************************99877 PP

      DUF260 100 e 100
                 +
  GAY38542.1 123 Q 123
                 6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MSNNAKYNTN ASIPRIGSNG TTQACAACKY QRRKCAPDCI LAPYFPHDRQ RQFLNAHKLF  60
GVSNITKIIK HLEPPEKDEA MRTIIFQSDV RANDPVGGCY RIIKELQRQI EYNKAELELV  120
LHQLAICRAQ AQQQAQAQLQ IPETDDSVLT FDIVSADPLN TFNSMQNFQY MQTQQEDQEE  180
YVNVDVNVQN HNLQEADVNA WALQDPAIVS TLNVKQDFLN NNDQSSTTTT VEDVKPSQQQ  240
LVEIPYERPD VKFEQEQDLV ERRFVPSTQL LISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.13e-68LBD family protein