PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38519.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 394aa    MW: 44059.4 Da    PI: 6.5857
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.34.1e-193077148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l+++v+ +G g+W++++++ g+ R++k+c++rw +yl
       GAY38519.1 30 RGLWSPEEDEKLINYVTTYGHGCWSSVPKHAGLQRCGKSCRLRWINYL 77
                     788*******************************************97 PP

2Myb_DNA-binding48.22.5e-1583125145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg+++++E  l+++++  lG++ W+ Ia++++ gRt++++k++w+
       GAY38519.1  83 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 125
                      899*******************.*********.***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
RETERQRDRK TETETEMGHH SCCNKQKVKR GLWSPEEDEK LINYVTTYGH GCWSSVPKHA  60
GLQRCGKSCR LRWINYLRPD LKRGSFSPQE AALIIELHSI LGNRWAQIAK HLPGRTDNEV  120
KNFWNSSIKK KLMSHEIVPA LASFPADFHN STCPEEVGFF SLNTNPNLIL NSHQQDHQFH  180
LPSPPPMFHN NFDQAEFKLN LSNYNVASIH FPPPPTIIPS SSTSSSSLDW SLPHHLQPQV  240
HLDPNPLENQ IFSHIEPVAP PHYYDDIIGD HDNKLNTTDP SIVTMPYDQN PFLVPTMPKL  300
CEILEGTVCN LPSSSASLEG VDPIAKLSCG TTFSSGSYPY HVPADPMEYT DAIMSILQPL  360
STSPSSSLSS LSPLSRGTYA TSTNPNFPST SWGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.23e-85MYB family protein