PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37906.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 307aa    MW: 34408.5 Da    PI: 9.6746
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.28.1e-082872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+ E + + +a + + ++   +W ++a++++ g+t  +++  + 
       GAY37906.1 28 RWTAAENKMFENALAVYDKDspdRWQKVAAMIP-GKTVVDVIKQYK 72
                     9********************************.******998886 PP
2Myb_DNA-binding47.44.4e-15136180347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r + + Rt+ q+ s+ qky
       GAY37906.1 136 PWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKY 180
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MKWETEVISP ASYISSSNWL LEESKSTRWT AAENKMFENA LAVYDKDSPD RWQKVAAMIP  60
GKTVVDVIKQ YKELEADISN IEAGLIPLPG YGNSSPFTLE WVNNHGYDGF KHPYAVGGKR  120
SSSVRPAEHE RKKGVPWTEE EHKLFLLGLK KHGKGDWRNI SRNFVTSRTP TQVASHAQKY  180
FIRQLSGGKD KRRASIHDIT TVNLNETRTS SPDTQRAPSP EQVTSGLSQQ QPNCGGALSR  240
TNFQWHQPNN GATTAFGSTQ GNMFMTSPYG INSYGIKMPG QNLQRDAVHE PYFGLQNLAF  300
QMQFPQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.14e-92MYB family protein